Salvelinus namaycush (lake trout): 120049139
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Entry
120049139 CDS
T07522
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120049139
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120049139
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GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
120049139
NCBI-ProteinID:
XP_038851297
UniProt:
A0A8U0QXF0
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Position
Sna6:41789818..41795977
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AA seq
932 aa
AA seq
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MVQLSPSPARDVSPSPECSEKGRQGSLKAGSPKIGSPGGLSPLQLALAASTTIYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALRKEQMVKQEVEKRRLCIVLQVKFLLQTLLQHEHIREDLLSAR
KLQVAELQSLLELAELLGVKRDNNVSLEDQMERAALVYLDLLEGTNKAVAGTTYKVLKAK
LAKLMDCGYFDCVPPPPSKSPKEVEDPMTKKTVSQTASLSTLMMSNKKDMPSREFLNRHY
LPDTDPNGCRDTPITQNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVP
VTSKKQNVEPKQALRVNTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGSFSFMQDSLLD
GEGSPTNGHPRLGRHASGSSSPLVQRDSRRSPVDLLPKTLHSTPLPSKLLPVDDEPSLTN
GDGGCLESCDLDLTTEDLAHIITIDPCLLLSESETACPSPPAPPPLYRRESSISITLDEK
TSSRTPISESGKQSPCNGVVPPCTSTQGQPFSTPPSRRTLTMAPPVPFQTMHSVFKVNAP
LLPTGDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEHLQSVNQSECLVGSGGQIFLS
PGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSFIPQAHLYGARDTGY
QHSYRRGGGNTGQRHNNRTGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVGMDLTPQVTP
HAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSNLGEMFNTNVG
RFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETASNHSILQLY
QGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgtctctccttcacctgagtgctccgag
aaggggaggcaggggagcctgaaggcaggtagccccaagattggctcccctggtgggctg
agtcctctccagctggccctggcagcctccaccaccatctaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacatggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcac
aagacccttggtggcctaacacaggaactactaaaggcccagaagaaggcgttgaggaag
gagcagatggtcaagcaggaggtagagaagaggaggctgtgcatagtactgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcagggaggacctcctctctgcccgc
aagctccaggttgcagagctacagagcctgcttgagcttgctgaactactgggggtgaag
agggacaacaatgtgagtttggaggatcagatggagagagcagccctggtctacctggac
ctgctggaggggacaaataaagccgtagccggaaccacctacaaggtcctgaaggctaag
ttggcaaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaagagt
cccaaggaagtagaggatccgatgaccaagaagacggtgtctcaaacagccagcctctct
accctaatgatgtcaaacaaaaaagacatgcctagcagagagtttcttaacagacactac
ctgcctgacacagaccccaatgggtgtcgagacactcccattactcagaactggaaggct
gagttccaggctatgaaggaacaggagccaccggactcatgggatatggagtccgactcc
actcagcctgtaatccagaaaccatggagaggggcggctgtgttaatctccaaagttcca
gttacctccaagaaacaaaatgtcgaacccaaacaggcacttcgtgtgaacacccctgtg
gaggtgttcaactcccagtcttccttgcccaaggaccccatcctgcgcaaacagcagctg
gaggacctgatgaccaagatcagaggctccttcagcttcatgcaggattctcttctggat
ggagaaggatcacccactaacggccatcctagactgggccggcatgcctctggatcctcc
tctccactcgtacagagagattcaaggagaagcccagtggaccttctccccaaaacactg
cattccactccattgccttctaaactcctccctgttgatgacgaacccagtctgaccaat
ggagatgggggttgcctagagagctgtgacctggacctaactacggaggacctggctcac
atcataaccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctctcct
ccagctcctcctcccctctaccgtagggagtcctccatctccatcaccctggacgagaag
acctcttctcggactcccatctctgaatccggtaagcaatccccctgtaacggtgtggtg
cctccttgtacttccacccaagggcagcccttttcaacccctcccagcagacgtacactc
accatggccccccctgttcccttccagaccatgcattcggtattcaaggtgaacgccccc
ttacttccgactggagactttaaatctgatattatcccctattcggactccaacggcctg
tgctatgtcaccaccagcacccagaccccaccggagtttgctccgtcggaggacgaacac
ctacagtcggtgaaccagtctgaatgtctggtgggtagtggtgggcagatcttcctgtcc
cctggccaatcaggtggcaccatgggccgttctgaccaatcatactacagaggatctgtt
agaggtattgcacgtggtggcaaggggttggcacactcctactttcgctcttctggtggg
cacagaggaggaagcttcatcccccaggctcacctgtacggagctcgggacactggctac
caacacagctacaggcgcggtggaggcaatacaggacaaaggcacaataatagaacaggt
tggagtgactcctcccaggtgagcagcccagaccgggagggcaactactccctggtggac
tccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccaggtgacccct
catgccccccacaccctgatgcacgtacccatgtacccgctcccccagcatccccagccc
ctccgcgtggccttcacagcagcccgcacagccaactacaccccgggcaccctggaccag
cccatcgcctttgaccagctccacagcaacctgggggaaatgttcaacaccaacgtgggt
cgtttcacctgcccagccaacggcacctacgtcttcctcttccacatcctcaagctggcg
gtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatggtgtctgcgtac
gccaacgacggggctccggaccacgagacggccagcaaccactccatcctgcagctgtac
cagggagaccaggtgtggctgcggctgcaccgcggctccatctatggcagcagctggaag
tacagcacattctctggcttcctgctctaccaggactga
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