Salvelinus namaycush (lake trout): 120049178
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Entry
120049178 CDS
T07522
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120049178 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120049178 (rapgef1a)
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GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
120049178
NCBI-ProteinID:
XP_038851367
UniProt:
A0A8U0QXH9
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Position
Sna1:15143351..15188444
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AA seq
1080 aa
AA seq
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MSGKIESKPDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPSLEHGVKTAEKPANKSL
SRLEEQEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVDARIQHSSG
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPVASPPESAAELPANEKESLDKSSATSQSMEVLTEPTGEEEEGVVAPP
KPPLPGLKIAEHNPPALPPKKRQSAPSPTRVAVVAPMSRTTSGSSLPMGIGLHKQAYEVD
ALHRRFSGGSHYYGGESPRISPCNSMGKLSKSDEQLSWTMDSGQCSRNTSSEALDTTDHY
DPDYDFLHQDLSSLEQMTPVPVGACLSPLPESHSESSSPCPGPGPPLAQPHFSPLQGCSV
SPLYSRMTYALPPPALPEKKRRGGACSGFSDGSYSGSSWCVSFERHPSQYDNLMEEDLPP
VPPFPLFTPDISPLCHAAGGFVSEFSSSETTDVPQSPPPLPEKKSRHILKYMQFVEDYSE
PQPSVFYQMPQSNSIYEQRNKRFQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLSESAN
EEGGEGEYVNLYTSSQANGDGLSRRDSSAIDDSLEDTASENPLCNNKDMSDDRRRQKSSE
DGQSSEETDELSLIDHMEIMSRLTLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCE
AFLTTYRTFITPEDLIKKLHYRYTRFCHCPDTFKKKVSKNTFFVLVRVVDELCLVEMTED
ILMQLMDLVFRLVCNGELSLARVLRTNILDKVEQRKLLRYTYSLKPLAARGVAARPGTLH
DFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSANLTQFTEHFNNMSYWVRSII
ILQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKTTSEGLEEY
CTLIDSSSSFRVYRAALADVEPPCIPYLGLILQDLTFVHLGNPDQINGKVNFSKRWQQFN
ILDSMRRFQQVHYDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaaaccagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacaccctcaaagaaagtc
agtaagccgtctttagaacatggtgtcaagactgcggagaaacctgctaacaagagtctg
agtcggttagaagagcaagagaaagatgtggtcagtgccttacgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggacgcaaggatccagcacagctcgggg
gtgtcctcctgtctgaaccgtgtgtaccagagtctgggcaatctcatccgttggtctgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgcttgatggtgttaaggagctagtgaaactgaccatagagaaacag
gagcatccttcccccacgtctcctgtcaaaccagtgccagtggcgtccccacccgagagt
gctgctgagctgcctgccaatgagaaggagagtctggacaagagctcagccacatcccaa
tctatggaagtcctgactgaacccactggagaggaggaggagggggtggtggccccgcca
aaaccccctctccctggcctcaagatagctgaacacaatcctcctgctctccctccaaag
aagcgccagtctgccccctcccccacccgggtggcagtagtggcccccatgagccgcacc
accagtggctccagtcttcccatgggcatcggcctccacaaacaggcgtacgaggtggat
gctctgcatcggcgcttctctgggggcagccattactacggaggggagtcgccgcgcata
tccccctgcaatagcatgggcaagctgagcaagtccgacgagcagctgtcctggacaatg
gacagtgggcagtgctcacgcaacaccagtagtgaggctctggacaccacagaccactat
gacccggactacgacttcctgcaccaggacctgtccagcctggagcagatgactcctgtg
ccagtgggagcgtgcctcagccccctgcctgagtcccacagcgagtcttcctccccctgc
cctggccccggtccgccgctggcacagccccacttcagccccctccagggctgctccgtg
tcccccctctactcccgcatgacttacgccctgccgccccctgccctgccggaaaagaag
cgccgaggtggcgcctgctcgggcttttccgatggctcctactcgggctcctcctggtgc
gtttcttttgagcgccacccatcccagtacgacaacctcatggaggaggacctaccgcct
gtgccccccttccccctgttcacgcccgacatctcgcccctgtgccatgccgccgggggg
tttgtgtccgagttcagcagcagcgagacgacagacgtacctcagagtccaccgccactc
cctgagaagaagagccgtcacatactgaagtacatgcagtttgtggaagactactcggag
ccccagccctcggttttctaccagatgccacagagcaacagcatctatgagcaacgcaac
aagcgcttccaggaagtctacggcttcaacgactcgtttagcagcagcgactctgtccac
gagcccctcccacccccggcactgccacccaaacagaggcagctgagcgaaagcgctaac
gaggaaggcggggagggagagtacgttaatctgtacacatccagccaagccaacggagat
gggctctcccgccgagactcgtctgccatagatgactcactggaggacactgcctcagag
aacccactgtgcaataacaaggacatgtccgatgaccgccgaagacaaaagtcctctgaa
gatgggcagagtagcgaggagacggatgagctttccctcatcgatcacatggagatcatg
tcccggttaacactaaagcaggagaacgacgacggtccagatgtccgagccggatcgggg
gatattttattagtccacgccacagaaacggaccgcaaagatcttgtcttgtactgtgag
gctttcctgacgacgtacagaacgttcataaccccagaggaccttatcaaaaagctgcac
tacagatacaccaggttttgtcactgcccagataccttcaagaagaaagtcagcaaaaac
accttctttgttctcgtccgtgtggtggacgagctgtgtctggtggagatgacggaggac
atcctgatgcagctgatggacttggtgttcaggctggtgtgtaacggtgagctgagcctg
gcccgcgtgctccgcacaaacatcctggacaaggtggagcagaggaagctgctgcgctac
acctactccctcaaaccactggccgcaagaggtgtcgctgccagacctggaaccctgcac
gacttccgaagtcatgagatcgccgaccagctaactctcctggatgcagagctcttctac
aaaattgagatccctgaggtgttgctttgggctaaggagcagaacgaggagaagagtgcc
aacctcacacagttcacagagcactttaacaacatgtcctactgggtacgctccataatc
attctgcaagagaaagcccaggaccgagaaaagctcctcctcaaatttatcaaaataatg
aagcacttacggaagctaaataatttcaactcatatttggcaatattatctgccttggat
tcagctcccatccgaagactggagtggcagaaaacaacctcagagggcctagaggaatac
tgcacgttaatagacagttcctcgtcgttccgggtctaccgagcggcactggcagacgtg
gagcccccatgtataccatatttgggtcttatcctccaggacttgacctttgtccatctg
ggcaaccctgatcaaatcaacgggaaggtcaacttctccaagcgctggcagcagttcaac
atcctggacagcatgaggcgcttccagcaggtgcattatgatctgaaacacaatgacgat
attgtctccttcttcaacgacttcagcgaccacctggcagaggaggctctgtgggagctg
tctttgaagatcaaacctcggaacattacgcggcgcaaaacagagcgcgaagagaagaca
tag
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