Salvelinus namaycush (lake trout): 120049249
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Entry
120049249 CDS
T07522
Name
(RefSeq) coatomer subunit beta-like
KO
K17301
coatomer subunit beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120049249
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120049249
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120049249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
120049249
NCBI-ProteinID:
XP_038851415
UniProt:
A0A8U0QVN4
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Position
Sna1:77110329..77117573
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKFRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKEAGEGKPEEEVSAAPAAKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVTIVQDKKRQNSFVAESMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVLVQADDPISFMQLTAKNETSSKEDQFQLSLLAAMGTTLKKEANDPMASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTNDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDISGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIADLNEYLHHILSSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTSV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtttgttacactttgatcaatgttccaaatgactccgaacct
ccatcggaagtcagtctcaaagcagacttggaaaaaggagagatcaaggcaaagacagag
gccctgaagaaggtaatcatcatgatactgaatggagagaagctgccaggcctactgatg
accatcatccgatttgtcctcccacttcaagaccacaccattaaaaagcttctgctagtc
ttctgggagattgtccccaaaacgactccagatggcaagctgcttcaggagatgatcctt
gtctgtgacgcctacagaaaggacttgcagcaccccaacgagtttatccgtggatccacc
ctgcgctttctgtgcaagttgaaggagtctgagctgctggagcccctcatgcccgccatc
cgcgcctgcctggagcaccgccacagctacgttcgccgcaatgctgtactggccatctac
accatctacaggaactttgaaaatcttatcccagatgcccctgagttgatccatgatttc
cttgtgaatgaaaaagatgccagctgcaagagaaatgctttcatgatgctcattcacgca
gaccaggacagagctctggattacctcagcacctgcattgatcaagtgcatacatttgga
gatattctccagttggtcattgtggagctgatttacaaggtgtgccacgctaacccgtcg
gagcgtgcccgcttcatccgctgcatctacaacctgttgcagtcctccagcccagccgtc
aagtacgaggcagctggcactcttgtcacgctgtccagtgcacccactgccatcaaggct
gctgcccagtgctacattgacctgattatcaaggagagtgacaacaacgtgaagctgatc
gtcctggatcgtctgatagagctgaaggagcatcccactcatgaacgtgttctccaggac
ctggtgatggacattctgcgtgttttgagcacgcctgacctcgaggtccggaagaagacc
ctgcagctggccttggacctagtctcatctcggaacgtagaggagttggtgatagttctg
aagaaggaggtgattaagaccaacaacgtgacggagcatgaggacactgataaattcagg
cagctgctggtgcgcaccctccactcatgcagtgtacgcttccctgacatggcggccaat
gtcattcctgtgctgatggagttcctgagtgacactaacgaggcagcggcggctgatgtg
ctggagtttgtgagggaggccattcagaggttcgacaacctgaggcccctcatcatcgag
aagatgctggaagtcttccatgccatcaggactgtcaagatctacagaggagcgctttgg
atcctgggagaatactgcagcactaaagaggacattcagagtgtgatgacagaagtgcgc
aggtcgcttggagagatccccatagtagagaacgagatcaagaaagaggctggggagggg
aagccggaagaagaggtgagcgcagcgccagcagccaaactggtgacagagatgggcacc
tacgtcacacagagtgccctcagctcctcccgaccctcaaagaaggaagaggacaggcct
cctctcaggggcttcttgatggacggagacttctatgtggcggcctctttagccacaacc
ctgaccaaagtggccctacgatatgtcaccatagttcaagacaaaaagagacagaattcc
tttgtggctgagtctatgctgatcatggccaccatcctccacttgggcaagtcctctctg
cccaagaagcccatcacagacgacgatgtggaccgcatctcgctgtgtctcaaggtgctg
tccgagtgttcgcccctcatgaacgacatctttaacaaggagtgccgcaagtccctgtct
cacatgctcactgtcaggctggaggaggagaagctatctcagaagaaagagtcagagaag
cggaacgtactggtgcaggcagacgaccccatttcctttatgcaactgacggccaagaac
gagacgtcctccaaggaggaccagttccagctcagtttactggctgccatgggaaccact
cttaaaaaggaggctaacgaccccatggcctccaaactcaacaaggttacccagctgact
ggtttctcagacccagtctatgctgaggcctatgtccatgtcaaccagtatgacattgtg
ctggacgtgctggtcgtcaaccaaaccaacgacacccttcagaattgcaccctggagctg
gcgacattgggtgacctcaagctggttgagaagccttctcctctcactctggcaccccat
gactttgccaacatcaaggctaacgtcaaagtggcgtccacagagaatggcatcatattt
ggcaacatagtgtatgacatatcaggagctgccagcgacaggaactgcgtggtccttagt
gacatccacattgacatcatggactacatccagccagcctcgtgcacagacgcggagttc
agacagatgtgggccgagtttgagtgggagaataaggtgactgtgaacaccaacattgca
gacctgaacgagtacctccaccacatcctcagctccaccaacatgaagtgcctgacccca
gagaaggcactttctggcttctgtggcttcatggctgccaacctgtatgcccgctccatc
ttcggtgaagacgcgctggccaatgtcagcattgagaagcccatccacctgggtcctgat
gcccctgtcaacggacacatccgcatccgggccaagagccagggtatggcattgagtctg
ggtgacaagatcaacctttcccagaaaaaaacatctgtataa
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