Salvelinus namaycush (lake trout): 120049279
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Entry
120049279 CDS
T07522
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120049279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120049279
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
hnRNP proteins
120049279
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Allexi_40kDa
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120049279
NCBI-ProteinID:
XP_038851454
UniProt:
A0A8U0UF78
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Position
Sna6:21484725..21487157
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AA seq
299 aa
AA seq
DB search
MMSGNVTNKTDPRSLHSRLFIGNLNTLLVTKADVEAIFNKYGKIVGCSVHKGFAFVQYAN
ERNARAAVAGEEGRMIVGQVLDINLACEPKPQRSKTVKRSAGDMYSSSFDLDYDFQRDYY
DRMYSYHSRVPPPPPPLSRPAIPSKHPRVSLSGVGRGSRRTKTSFSSSTSRSSQSRTSTS
HTMKTDDLQTIKRELAQIKHKVDDLLESLERMEKDHSKKSDMKSSGKPETLEVSHLLNCG
GKEDSLKRERENQSLNDSEEEEEGDLLDEEEVQSRGREDNDEEEEEGEDDGDGANGDDA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggcaacgtgaccaacaagacggaccctcgttcgctccattcccggcttttc
atcgggaacctcaacacactcctggtcaccaaggcagatgtggaggccatcttcaacaag
tacggcaagattgtgggctgctccgtccacaaggggttcgcgttcgtccagtacgccaac
gagaggaacgcccgggccgctgtagcgggcgaggaagggaggatgattgtaggacaggtg
ctagacattaacctcgcttgtgaaccgaagcctcagagatcgaagacggttaaacgctct
gcaggagacatgtacagttcttcatttgatttggactatgacttccagagagattactat
gaccggatgtactcataccattcccgtgtgccccctccgcctccacccctgtcccggccg
gcgatcccctccaaacatccccgggtcagtttgagtggagttggaaggggcagccgacgc
accaagaccagcttctcatcttccacctccaggagcagccagagcaggacctcgacctca
cacaccatgaagacagatgacctgcagaccatcaagagagagctggcccagatcaaacac
aaggtggacgacctgctggagagtctggagcgcatggagaaggaccacagcaagaagtcc
gacatgaagagtagtgggaagccggagacactggaggtgtctcatctcctcaactgcgga
gggaaggaggacagcctaaagagggagagagagaaccagtctctcaacgactcagaagag
gaggaggagggtgacctactggatgaagaggaggtacagagtcgaggaagggaggataac
gatgaggaagaggaagaaggcgaggatgacggagatggcgccaacggagacgatgcttaa
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