Salvelinus namaycush (lake trout): 120049413
Help
Entry
120049413 CDS
T07522
Name
(RefSeq) lumican-like
KO
K08122
lumican
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120049413
Proteoglycans [BR:
snh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
120049413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_9
LRR_EndoS
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120049413
NCBI-ProteinID:
XP_038851610
UniProt:
A0A8U0QYH9
LinkDB
All DBs
Position
Sna6:complement(45626210..45630078)
Genome browser
AA seq
342 aa
AA seq
DB search
MFPLRVPIFAVLVSLTVGQYDDYDYQPASQYGPSSANCAQECECPINFPTAMYCDSRNLK
FVPIVPSGIKYLYLQNNLIEEIKAGVFDNVTAELRWLVLDHNQITNDKVAKGTIDKLTGL
HKILFSFNKLTEAVIPPSKSLDELKMMNNQLSKFPAGSLAGMQNLTSVHLENNELTSKAL
NGVFKGLNKLVAIDLTNNKLKKLPSGMPSSLETFYGDHNDISSIAAGDLKELPKLAYLRL
AYNQMTDAGIPAGVFNVTSLIELDLSYNKLQSIPEINEQLEHLYLQVNEINKFNLENICK
FSGPLNYSRLKHLRLDGNNITHADLPHDSSNCLRQASDIIFD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccctccgtgtccccatctttgccgtgctggtcagcctgaccgtgggtcagtac
gatgactacgactaccagccggcttcccagtacggcccgtccagcgccaactgtgcccag
gaatgcgagtgccccatcaacttccctactgccatgtactgtgactcccgcaaccttaag
tttgtgcccattgtgccctcaggcatcaagtacctgtacctgcagaacaacctgatcgag
gagatcaaggctggggtcttcgacaacgtcacggctgaactccgttggctggtcttggac
cataaccagatcaccaatgacaaggtcgccaagggaaccatcgacaagctgaccggactt
cataagatcttgttcagcttcaacaaactgaccgaagctgtgatccctccctccaagtcc
ttggacgagctgaagatgatgaacaaccagctgtccaagttccccgcagggagtctggcc
ggcatgcagaacctgacctcggtccacctcgagaacaacgagctgacatctaaagctctt
aacggggtcttcaagggcctcaacaagctggtggccatagacttgaccaacaacaagctg
aagaagcttccctcaggcatgcccagttcgctggagaccttctatggcgatcacaatgac
atcagcagcatcgcagccggggacctcaaagagctgcccaagctggcgtacctgaggttg
gcctacaatcagatgacggatgcagggattccggcgggcgtgttcaatgtgacgagcctg
atcgagctggatctgtcctacaacaagctgcagtccatccctgagatcaacgaacagctg
gagcatctctatctgcaggtcaacgaaatcaacaagttcaacctggagaatatttgcaag
ttctctggccctctgaactactccagactgaagcacctgcgtctggatgggaacaacatc
acacatgccgacctaccccatgactcctccaactgcctgcgccaggcctccgacatcatc
ttcgactaa
DBGET
integrated database retrieval system
