Salvelinus namaycush (lake trout): 120049481
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Entry
120049481 CDS
T07522
Name
(RefSeq) homeobox protein HMX1-like
KO
K09349
homeobox protein Nkx-5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120049481
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
120049481
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
EBP50_C
Motif
Other DBs
NCBI-GeneID:
120049481
NCBI-ProteinID:
XP_038851674
UniProt:
A0A8U0R191
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Position
Sna6:complement(10224906..10225871)
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AA seq
210 aa
AA seq
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MRFLFTRGPQCHSSNSDDPGYSLPTSDRDSPALPEPVEDHDERNERAECSQTDDKDDETG
SSCFARDDSDTPDTKAARKKKTRTVFSRSQVFQLESTFDMKRYLSSTERAGLAASLQLTE
TQVKIWFQNRRNKWKRQLAADMASTSIAFSAQRIVRVPILYHENASPGTLNANLAQVSPP
LVGFSSTVNFPISQFTHPMSFIRSQMTGLV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcctctttacacggggtccgcagtgccactccagcaactcagatgaccccgga
tactccctaccaaccagcgaccgggattccccggctctaccggagccagtggaagaccac
gacgaacggaacgagagggcagagtgcagtcagacagacgacaaggatgacgaaacagga
tcctcctgcttcgcgcgagacgatagtgacacacctgatacgaaagcagctcgcaagaag
aagacccgcaccgtgttcagccggagtcaggtgttccagctggagtccaccttcgacatg
aaacgctacctgagcagcactgagcgggcggggctggccgcttctctacaacttaccgag
actcaggtcaagatttggttccagaaccgcaggaacaagtggaagagacagctagctgcc
gacatggcgtccacgagtatcgccttttcggctcaaaggattgtcagggttcctattctt
taccacgagaacgcttcacctgggacactgaacgcaaacctggcacaggtgtcgccaccc
ttagtgggtttttcgagtactgtgaattttcccatctcccagttcacccaccccatgtct
tttataagatcacaaatgacaggcctagtgtga
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