KEGG   Salvelinus namaycush (lake trout): 120049561
Entry
120049561         CDS       T07522                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120049561 (per1b)
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120049561 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120049561
NCBI-ProteinID: XP_038851765
UniProt: A0A8U0UGC4
LinkDB
Position
Sna6:complement(2980307..3000090)
AA seq 1384 aa
MSYADSNSAAGDDTWGRVGSANEEEEAGTGVSSLRSNNNHGSQSGTSDLANRVRGSSPSG
SGSGGSSGGDQRGPISDDGDALSSGNDSGERESSEGGSGSRGHQSRSSHCSSSQKDSGMM
LENTESNKSSNSLSQSPSPPSSSLAYSLLSASSEQDPPSTSGCSSNEHHQTARVQTQKEM
LKALKELKVRLPTECKGKGRSSTLDALQYALNCVKQVRANQEYYHQWSVEECHGCSLDLS
AYTIEELDNIASEYTLKNTDTFSMAVSFLTGKVVYISPEGSSLLRCKPERLQGAIFSELL
APQDVSTFYSSTAPCRLPAWATYMGSVSPPTDCTQGKSMFCRISADRAQGGEIKYYPFRM
TPYQLTLRDLDTSDPQPCCLLIAERVQSGYEAPRIPADKRIFSTSHTPSCLFQEVDERAV
PLLGYLPQDLVGSPVLLYLHPEDRPIMVAIHRKILQSAGQPFDSSPMRMCARSGEYVTID
TSWSSFINPWSRKVAFIVGRHKVRTSPLTEDVFTPLRGCEGRPMAPEIVQLSEQIHRLLV
QPVHSGGSQGYSSLASNGSWSHEQQYRRTASSASDSKSTNAMEAMEAAVVALHKPMTFQQ
ICKDVHMVKTSGQQVFIDSRNRALSRRHAVTALRAIGEVEPVKSLIPEVACPPKTPVFNT
QQLMEEPPSAYSYQQINCLDSIIRFLDGCNVPNTVKKKFGLSSGTSTSDEDKQQETAGNA
KGGPATTVTLVGDSAGVHPLAMHSHKAKSVASVTSQCSFSSTIVHVGDKKPPESDVVMED
APPTPMPATPTTTKSPPTAIIAPPPPRTTSPPSRRGGGLTKGLTKEVLSAHTQQEEQAFL
CRFSDLSQLRVIEPAEALRFPLPNSNPRRRGACSPDYHAAGGSSGRRGAKRLKQQESSEQ
RGPLALGLTGPVGGPNVVPMNSPPSSTYTLPMMPLGPPTTSSWPASVGSQASLPSVPYPS
GTLPLYPIYPPLSQPIQNQMVPPMMALVLPNYMFPQLNPNLPQMVTAMNTMGSPMPQPGA
AMVTPGPQQFFNPNAGFPFPGTSVMPCPMPTMPSLMQTAMPIQTQRPASGSSTPQSCSQV
PVGQEGAESPLFHSRCSSPLNLLQLVEESPSNRPEVATALAASALQATIPAQGTRGRSAD
DSKENANDSSQDGESTPSDILDLLLQEDSRSGTGSASSGSGSDCLGTVSNGCSSSGSGTS
RSRSSHTSKYFGSIDSSENDHSRKQPAGGSRAGGDGEEQLIKCVLQDPIWLLMANTDHKV
MMTYQLPTKDRETVLRQDREALRAMHKRQPRFTEDQKRELSQVHPWIRTGRLPRAINVSA
CMGCKSSPLPESTMDQGGEAHREESNAAHSETQGNDQEMTTEEQEVTWPTEEAKARAAES
KMTH
NT seq 4155 nt   +upstreamnt  +downstreamnt
atgagttatgccgactcaaactccgccgctggcgatgacacttggggacgagtgggaagc
gccaatgaagaagaggaggcgggaacaggagtgagctccctccgcagcaacaacaaccat
ggcagccaatcgggaacttcggacttggccaatcgggtgcgaggatcctctccaagtggt
tccggctccggtggctcgtctgggggggaccagaggggtcccatctcagatgacggggac
gctttatccagcgggaacgactccggcgagagggagtcgagtgagggagggagcgggtcc
aggggacatcagtccaggagttcccactgctcctccagccagaaggactcgggcatgatg
ctggagaacacagagagcaacaagagctctaactctctgtcccagagcccgtctcccccc
agcagttccctggcctacagcctgctgtcagccagctcagagcaggaccctccttccacc
tccggctgcagcagcaacgagcatcaccagacggcccgcgtccagacccagaaggagatg
ctgaaagccctgaaggagctcaaggtccgcctaccgaccgagtgcaagggcaaaggtcgc
tccagcaccctggacgccctccagtacgccctgaactgtgtgaagcaggtgagggccaac
caggagtactatcaccagtggagtgtggaggagtgtcatggctgcagcctggatctgtct
gcgtataccattgaggagctggacaacatcgcctcagagtacaccctcaaaaatacagac
accttctccatggcggtgtccttcctgacaggcaaagtggtgtacatctccccggagggc
tcatccctgctgcgctgcaagccagagaggctccagggggccatcttctccgagctgctg
gctccccaagacgtcagcaccttctacagcagcacggccccctgccgcctgcccgcctgg
gccacctacatgggctctgtgtccccaccgacagactgcacccaggggaagtccatgttc
tgtcgcatcagtgccgaccgggcgcagggaggcgagatcaaatactaccccttccgcatg
accccctatcagctaaccctgagggacttagacacgtcagacccccagccctgctgcctg
ctcatcgctgagcgggtacagtctggatacgaagctcccaggatcccggctgacaagcgg
atcttttccaccagtcacactcccagctgtctcttccaggaagtagatgaaagggctgtg
ccgttgttgggctaccttccccaggacctggtgggaagccctgtactcctctacctccac
ccagaggacagacccatcatggtggccatacataggaagatcctccagtctgcaggccag
cccttcgacagctctcccatgaggatgtgtgcccgcagtggggagtatgtgaccatcgac
actagctggtcctccttcatcaacccctggagcaggaaggtggccttcatcgtgggccgc
cacaaagtccgaaccagccccttgaccgaggacgtgttcacccctctgcggggctgtgag
ggccgccccatggccccggagatcgtgcagctgagcgagcagatccaccgtctcctggtg
cagccggtccacagtggagggtcgcagggctacagcagcctggcctcaaatggatcctgg
tcccacgagcagcagtaccgacgcacggcctcctccgcctccgacagcaagtccaccaac
gccatggaggccatggaggcagccgtggtcgctctgcacaaaccgatgacgttccagcag
atctgtaaggacgtgcacatggtcaagaccagcgggcagcaggtctttatcgactctcgc
aaccgagccctgtcccggcgacacgctgtcacagcgctccgagccattggagaagtggag
cccgtcaagagtctgatcccggaggtggcgtgtccacccaaaaccccggtgttcaacacc
cagcagctgatggaggagccccccagtgcctacagctaccaacagattaactgtctggac
agcatcattaggttcttggacggctgtaacgttcccaacacggttaagaagaagtttggc
ttgtcctctggcacgtccacatcggacgaagacaaacagcaggaaaccgctgggaatgca
aaaggtggtccagctactacagtcaccctggttggggactcagcgggggtacaccccctg
gccatgcacagccacaaggcgaagagtgtagcctcagtcacctctcagtgcagcttcagc
agtaccatcgtccacgtgggagacaagaagccccccgagtcagacgttgtcatggaagat
gctcctcccactcctatgccagccactcccaccacgaccaagtctccaccgaccgccatc
attgcccctcccccgcccagaacgacctctccacccagccggagaggaggtggcctgacc
aagggcctgaccaaggaggtgctctctgctcacacacagcaggaggagcaagccttcctc
tgtcgcttcagtgacctgagccagctgagggtgattgagccagctgaggccctgcgtttc
ccgctccccaacagcaacccccgccgcagaggagcgtgttcccctgactaccatgcagct
ggaggcagcagtggccgccgtggagccaagaggctgaagcagcaggagtcctcagaacag
aggggccctctggctttgggcctgaccggacccgtcgggggccccaatgtcgtccccatg
aactccccccccagctccacctacaccctcccaatgatgcccctggggcctcccacaaca
tcctcctggcccgcctccgtaggatcccaggccagcctgccctctgtgccctacccctcg
ggcacgctccccctctaccccatctaccctcccctctcccagcccatacagaaccagatg
gtgcctcctatgatggccctggtgctgcccaactacatgttcccacagctcaaccccaac
ctcccccagatggtcacagccatgaacacaatgggaagccccatgccccagccgggcgcc
gccatggttacccccggcccacagcaattcttcaaccccaacgctggtttccccttcccc
ggtaccagcgtcatgccatgccccatgcctacgatgccctcgctcatgcaaactgccatg
cctatccagacccaacggccagcctctgggtccagcacccctcagtcatgtagtcaagta
ccagtcggccaggagggtgcagagtcgcccctcttccactctcgctgctcctcccccctc
aacctgctgcagcttgtggaggagtcgcctagcaaccggccggaggtcgccacggcgctg
gctgcttccgcgctacaggccacgatccccgcacaagggactcgggggagatcggcagat
gactccaaggagaacgccaatgattccagccaggatggtgaatccacccccagtgacata
ctggacctgctcttgcaagaggactctcgctcaggcaccggctccgcgtcctctgggtcg
ggttctgactgcttgggcactgtgtccaacggctgcagctcctcaggcagtggaactagt
cgcagtcgcagtagccacaccagcaagtactttggcagcatcgactcgtcagagaacgac
cactcccgcaagcagccagcaggtggcagcagagcaggaggcgacggggaggagcagttg
attaagtgtgtcctgcaggatcccatctggctcctcatggccaacaccgaccacaaggtt
atgatgacctaccagctgccgaccaaggacagggagacggtgctgcggcaggaccgcgag
gccctgcgggccatgcacaaacgccagccccgcttcactgaggaccagaagagagaactg
agccaggtccacccctggatacgtaccgggcgcctgccacgcgccatcaacgtctcggca
tgtatggggtgcaagtcttcccccttaccagagagcaccatggaccagggaggagaggct
cacagagaagagagcaatgcggcgcactctgaaacacaaggcaacgaccaggaaatgaca
acagaagagcaggaagtgacctggccaacagaggaggcgaaagcaagggctgccgaatcc
aaaatgacccactga

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