Salvelinus namaycush (lake trout): 120049567
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Entry
120049567 CDS
T07522
Name
(RefSeq) suppressor of hairless protein homolog
KO
K06053
recombining binding protein suppressor of hairless
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120049567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120049567
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other transcription factors
Others
120049567
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
120049567
NCBI-ProteinID:
XP_038851775
UniProt:
A0A8U0QYT6
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Position
Sna6:complement(6018846..6110015)
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AA seq
486 aa
AA seq
DB search
MAPVVTGKFGERPQPQRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKREEMEREGCSEQEAQPCAFIGIGNSDQEMQQLNIEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYVHLLDDEESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALLDADDPVSQLHKCSFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTSNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTTLTFTYTPEPGPRPHCNAAGAILRAGSDRLLTASSNSDANNSYGPNNAGVTSSST
AAAVVS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagtttggggagcgccctcaaccacagcgcctaacaaga
gaagcgatgaggaattacctaaaggagcgaggagaccaaactgtcctgatcctgcatgca
aaagttgcccagaaatcttatggcaatgaaaaaaggttcttctgtccacccccatgtgtc
tacctgatgggctctggctggaagaagaagagagaggagatggagagagaaggctgttca
gagcaggaggctcaaccctgtgcctttatagggataggaaacagtgaccaggagatgcag
cagctcaacatagagggaaagaactattgcacagccaagaccttgtacatatcagactcc
gacaagagaaagcacttcatgctgtcggtcaagatgttctacggcaacagcgccgacatc
ggcgtcttcctgagtaagaggataaaagtcatctccaagccctccaagaagaaacagtcc
ctgaagaacgcagacctgtgtattgcatcgggtaccaaggtggccctgttcaaccggttg
cggtcccagacggtcagcacgcgctacctacatgtggaggggggaaacttccacgccagc
tcccagcaatggggtgccttctacgttcacctgttggatgacgaggagtctgaaggagag
gagttcactgtgagagatggctacatccactatggtcagacggtcaaactggtctgctct
gtcaccgggatggccctgccacgcctgatcatccgtaaggtggacaagcagacggccttg
ttggatgcagacgaccccgtctcccagctgcacaagtgttccttctacctgaaggacaca
gagcgcatgtacctgtgtctttcccaagagaggatcatacagtttcaagccactccatgc
ccaaaggaaccaaacaaagagatgatcaacgacggagcgtcctggacaatcatcagcacg
gacaaggctgagtacaccttctacgagggcatgggccccgtccactcgcctgtcaccccc
gtgcctgtagtcgagagcttacagctaaacgggggcggggatgtggccatgctggagctg
acgggacagaacttcacctcaaacctgagggtctggttcggagacgtggaggcagagacc
atgtacaggtgtgcggagagcatgctgtgcgtggtacccgacatctcagccttccgcgag
ggctggcgctgggtacgtcagccggtgcaggttcccgtcacgctggtgcgaaacgacggc
atcatctactccaccacgctcaccttcacctacacgccggagcctgggccgcggccacac
tgcaacgccgccggagccatcctacgggcgggcagcgaccgccttctaacggctagcagc
aacagcgacgctaacaacagctacggccccaacaacgcaggagtcacatcctcttccacg
gctgcagccgtggtgtcctaa
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