Salvelinus namaycush (lake trout): 120049591
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Entry
120049591 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120049591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120049591
Spliceosome [BR:
snh03041
]
Complex A
Other components
Complex A specific factors
120049591
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
120049591
NCBI-ProteinID:
XP_038851814
UniProt:
A0A8U0UFK3
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All DBs
Position
6:8272057..8284356
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AA seq
682 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGLMPPPGPPVAFPSLPNFQPPIPNVSFPQAH
PVFTAVAAFPTPPQPPQGAGMQSQSDFGQKKARKRSRWNSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSINQN
SGHNRGSNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGNQHGGHGNHGGHGGHGGHHN
FPPPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPPNNQPPP
PPSGPLPPWQQQAPPPPPTSSMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAASAAQ
PPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNFVTMMG
MGVPGMPPFGMPPAPPPPPPQN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcgaatgcaacccctctagggaagctgcacccgagtatcggcgctaaa
cgaggctttgatgctgggcctggtgcggggttaatgcctccacccgggcctcctgtggcc
tttccttcgctaccgaattttcagccaccaattccaaacgtgtctttcccgcaagctcac
ccggtgtttactgcggtggctgcttttcccaccccaccacaaccaccccaaggtgccgga
atgcagtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggaatagt
gaaacacccgaccagaagacagtcattcctggtatgcccaccgtcatcccgcctggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacagatccccgtctccagag
cccatctataacagcgagggcaagaggctgaacaccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcattccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagccaccagagtcaacgacaaggtgatgattccacag
gacgagtacccagagatcaactttgttggcctgctgattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggtaagggctcggtaaag
gagggcaaggtgggccgtaaggatggccaaatgctgccaggagaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggctgtggaacagatccgcaca
atcctcaagcagggcatcgagacccctgaggaccagaacgacttgaggaagatgcagctg
agagagctggccagactcaacggaaccctgagagaggacgacaacaggatcctacgtccg
tggcagagcactgagccccgcagcgtcaccaacacgaccctttgtactaagtgtggcggt
gcaggccacatctcctcagactgcaagttcaccagctcctttgctgcgcccagggccggt
gagcccccccagtctgcccaggacaaggcccgtatggacaaggaatacctgtccctcatg
gcggagctgggcgaggcccctgtaccctcctctggtgggggacactccatcaaccagaac
agcggccacaacagaggcagcaacaaccagccaccaccgagccgtcctccctggatgaac
tccggccagtctgagaacaggaacttccacagcatgcacggaggccacggtggtcatggc
aaccaacacggtggtcatggcaaccacgggggtcatggaggtcacggaggccaccacaac
ttcccaccccccatgtccaacatgggagggcaccccatgccccccaacaatggcatgcca
cccccgtggatgcagcccccaccgccccccatgggccagggacatggacaccatatgggt
ctgttgcctccacccatgatgccaccaccacctccacccccgaacaaccagcctccccct
ccaccctcgggtcccctgcctccatggcaacagcaggcccctccaccccctcccaccagc
agcatggccactagtgcaccactgccatggcaacagaataccaccacaacgtccagtcct
ggcactggcaacctgcccccctggcagcagccccaacagtccgctgcctcggctgcccag
ccccctccccccatgggcaacccctccatggtcccacctccgcccggagtccagccccct
ctgccacctggcgccccacctccccctccccccccaccccccggctcagccggcatgatg
tatgcccctccacctccccctccgcccatggatccctccaactttgtcaccatgatgggt
atgggggtgccaggcatgccccccttcggtatgccccctgcgccgccacctccacccccc
caaaattaa
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