Salvelinus namaycush (lake trout): 120049603
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Entry
120049603 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04114
Oocyte meiosis
snh04218
Cellular senescence
snh04261
Adrenergic signaling in cardiomyocytes
snh04270
Vascular smooth muscle contraction
snh04510
Focal adhesion
snh04810
Regulation of actin cytoskeleton
snh04910
Insulin signaling pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120049603
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120049603
04218 Cellular senescence
120049603
09144 Cellular community - eukaryotes
04510 Focal adhesion
120049603
09142 Cell motility
04810 Regulation of actin cytoskeleton
120049603
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120049603
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120049603
04270 Vascular smooth muscle contraction
120049603
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120049603
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120049603
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120049603
03019 Messenger RNA biogenesis [BR:
snh03019
]
120049603
03041 Spliceosome [BR:
snh03041
]
120049603
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120049603
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
120049603
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120049603
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120049603
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120049603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
120049603
NCBI-ProteinID:
XP_038851827
UniProt:
A0A8U0R070
LinkDB
All DBs
Position
Sna6:9663140..9702148
Genome browser
AA seq
327 aa
AA seq
DB search
MAEGELDVDSLIARLLEVRGCRPGKIVQMSEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK
KAKYQYGGMNSGRPVTPPRTVVPPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggggaattggacgtagactcgctgatcgcccgactattagaggtgcgggga
tgtcgcccagggaagatcgtgcagatgtcagaggctgaggtgagaggcctctgcataaag
tccagagagatcttcctcagccagcccatcctgttggaattggaggctcccctcaaaatc
tgtggtgacatccacggccagtacacagacctgctgcggctctttgagtacgggggcttc
ccgcccgaagccaactacctgttcctgggggactacgtggaccgaggcaagcagtccctg
gaaaccatctgtttactgctggcttacaagatcaaataccctgagaacttcttcctcctc
aggggcaaccacgagtgtgcttccataaaccgcatctatggcttctatgatgagtgtaag
cgcagattcaacataaagctgtggaagacatttactgactgcttcaactgccttcccatc
gctgccatcgtagatgagaaaatcttctgttgccatggaggcctctctccagacctgcag
tctatggagcagatccgtcgtatcatgagacccacagacgtccctgacaccgggttgctg
tgcgatttgctgtggtcggacccagacaaagatgttcagggttggggggagaacgaccgc
ggggtctcgttcacgtttggggctgatgtggtcagcaagttcctcaaccgccacgatctg
gacctcatctgcagagcccaccaggtggtggaggatggctatgagttctttgccaagcgg
cagctggtgactctgttctcagctcctaactactgtggagagtttgacaatgccggcggc
atgatgagtgttgacgagaccctgatgtgctcctttcagatcctgaagccgtctgagaag
aaggccaagtaccagtatggagggatgaactccggccgacccgtcaccccgccccgcacc
gtggtcccaccaaagaaacggtga
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