KEGG   Salvelinus namaycush (lake trout): 120049617
Entry
120049617         CDS       T07522                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120049617 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120049617 (snrpa1)
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120049617 (snrpa1)
 Complex B
    120049617 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    120049617 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_4 LRR_8
Other DBs
NCBI-GeneID: 120049617
NCBI-ProteinID: XP_038851861
UniProt: A0A8U0QWI5
LinkDB
Position
Sna1:complement(79317212..79320660)
AA seq 339 aa
MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDFSDNEIRKLDGF
PLLKRLKTLLMNNNRICRVGENLEQALPSMRELILTSNNIQELGDLDPLASVKTLTLLSL
LRNPVTNKKHYRLYVINKIPQIHVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKRTKT
FTPGAAVQQPEKKKMGPSPADVEAIKNAIANASSLAEVERLKGMLQAGQIPGREVRQVPP
EMVEVEEEEEENGVVHMQREIQTEEGNGVEEMEEDVVEVQGKVEEVQGKVEEVAVKEVEK
VEKEEVEEEEEREEGKEQESEEDESEDDDMDEDSPVNGS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggtcaaactatcggcagagctaattgagcaggctgctcagtacacaaaccccgtgcgc
gacagggagctggatctgcgaggttacaaaattcctgtacttgaaaaccttggggctaca
cttgaccagtttgataccatcgatttctctgacaatgaaatcagaaaactggacggcttc
cctttgctcaagaggctcaaaacgttgctcatgaacaacaacagaatatgtcgtgttggt
gaaaaccttgaacaggcattgccgagtatgagggagctgatcctcacaagcaacaacatc
caggaattgggtgatttggatccgctagcctcagtgaagacattgacccttctcagtctc
ctaaggaatccagtgaccaacaagaagcactacaggctctatgtcatcaacaaaattccc
cagattcacgtgcttgacttccagaaggtcaagttaaaggagcgtcaggaggcggagaaa
atgttcaagggcaaacgaggtgctcagcttgcaaaggatattgccaagcggaccaaaacg
ttcacccccggagctgccgttcagcagcctgagaagaagaagatgggaccatctcccgct
gacgtggaagcgatcaagaatgcaatagcgaacgcctcgtctctggccgaggtggagaga
ttgaaggggatgctgcaggctggtcagatccccggacgggaggtcagacaagtccccccg
gaaatggtggaggtggaagaggaagaggaggagaacggggttgtgcatatgcaacgagag
atacagacagaggaaggaaatggagtggaagagatggaagaggatgtagtggaggtacag
ggaaaggtggaggaggtacagggaaaggtggaggaggtagctgtcaaggaggtggagaag
gtagaaaaggaagaagtggaggaggaagaagagagggaggagggtaaagaacaagagtct
gaggaagatgagtctgaggatgatgatatggatgaagactcaccggttaacggatcatga

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