Salvelinus namaycush (lake trout): 120049639
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Entry
120049639 CDS
T07522
Name
(RefSeq) DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049639
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120049639
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GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
120049639
NCBI-ProteinID:
XP_038851885
UniProt:
A0A8U0UGG2
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Position
Sna6:10695382..10750384
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AA seq
1944 aa
AA seq
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MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSPEIFLCYKRGHDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSVSNSINYKAGLIFRYPEDNYESFPLSESVPLFCLPMGAKIEC
WTPNTRYPLPVFSTFVLTNSSGEKVYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPMPLSGADYSTLLINLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKNLPKKPCKSLFNSLTNLQHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPNTEDESDPPTRYSYKSFPRLRMDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATEGPTIITTVVSVSGDRLSHGSADHSSEVNGEDHTLFARSLIIGDATDNHCSTGGQS
DQGYGSKDELHQEQVDLAQSAAPLVDVDHRSKPKAQHNGGDIAGSVDSSVVVAEPTSPVE
AIPHVPSIVKLSTGGSFDTATKRGDTGPGKLFSLRSQSEDVSLPEEGESAAPGGSGEEGP
AVQGQRQKAFSERSCSFSVESRAGMLMEKHGVDHIARRMGADARILAAALSGCGTTQPPT
NLPSKALFKELESEGRGPMLGKLSEEGSVLDPTALEEGLGKEEKRMDGEDEMGLKLEEEG
DLGGSGDSSLPTLEMKEVEVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRNLADEIE
MYMSLRSPLGPKSSSMEFHQGGQGGGSSPDTAPVKQALERRSSLPVPPVKHPGGSSGDST
PKRSPAAVTRSKTFTGMATRSPASSGGVVASPRSSLTALVRSSQNGSLGSVINSISGMKM
DTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFPAGLDES
MLSGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRPGRGPDSD
QGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTTCPFCRTA
FLPLLHVEFHDLRTNTAFYLKPSASGDSIHSASHQPTTTGSTVLKVGAAADTPRLDLISF
PESSSEDPGEAPASQTATHKSLVPVPEPAQSDPLGLLELQAGKRGTSLTRSNSVGGPLQS
LVSAQRQPGHGVSTTSLPCSLTEVDGLGPKRPNPMPVSVPYLSPLVLRKELETLLENEGD
QVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSLSQDSKQV
YVQLLWDNINLHQEPGDPLYQSWRTLLEKKGTLAPTDHQETRTLLNSIVRSIQTNDVYGP
INLLLREVKRHPEVKRQRGIYREILFLALVALGREDIDVEAFDREYRLAFDDLSTEQLKT
LHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgccactggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
atcactgacctggctgtcatcaacaagtcggcgggcgagacggtgccggagggcttcacc
tgcatcgagagcacctacagcgcgcagcaggccaacctcaaccatggtagccttaagagc
cccgagatatttctctgctacaagaggggccacgacaagcccccgctcattgacatcggg
gtgttatatgaaggtaaggagcgtctcatccagggctgtgaggtaatccaggccacgccg
tatggccgctgtgccaacgtcaacaacagctctgccacctcacagcgtatcttcatcacc
ttacgccgcgcgccgcccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctctagtgttttcctgtgctacaagaaatcagtgtcggtgtcc
aactccattaattacaaagccggcctcatcttccgctacccagaggataactatgagtca
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgaatgc
tggacccctaacacacgctaccctctgcctgttttctccacctttgtgttaaccaactcc
tctggggaaaaggtgtacggcgcggccatccagttctatgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacagtcaacaccaacaagtgcatctgcctcctttcccgctggcccttcttc
gagtctttccgcaaattcctcatgttcctctacaagctgtccgtctcgggcccccacccg
ctgcccatcgaaaagcacatctcacatttcatgcacaacgtgtccttcccctcacctcag
aggcccagaatcttggtccagctctctgcacacgacactttgatgctcgcacaacctgtg
tgtactcctatgcctctcagtggtgcagactacagtacactgctgattaacctgggctca
gagaactgtgccacgctattgcactttgtcctgctggagagtaagatcctgctgcactcc
ttgagacccgctgtactcaccggggtagcagaggctgtggtggcgatgatttttccattc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaacgca
ccctgtcccttcattgtgggtgtggactcccgctactttgacctctatgaccccccgccg
gacgtggtctgtgtggacctggacaccaatacgatctacctgtctgatgagaagaaacac
agcaactggaagaacctcccaaagaagccctgcaagagtctgtttaactccctgaccaac
ctgcaacaccagctgggcatcgtgcgtaggacggcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctacctcaaa
cccatcacccaggccccctctgagaaagccacctctgcagactcactatatgacctacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacattcgtcagcgacaaggacacaggcctt
gccttcttcgacgactgcatcgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacactaagctcatggaactagacgaatcacag
aagagcgagcatacagtcttcgtcatgcccccagaacctcccaacaccgaggatgaatct
gatccccctacccgctacagttataagagtttccctcggttgcgtatggacctgtttgac
cgtcccagagaggtgataccagcgctgaggagcagtacaccaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccactgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgcccgtgggggtgaggctggtccagtcaaagagctgggccatg
cagcaggcctacaacgtcctgctcaagatgaggacctctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttgtacggtcagccggtcatggccgtc
cgtgttctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctatggctac
tacaacaaggctgttctggaaggcccctggccaagtcggaaccgcagcggtctcttcatg
tgggccaaggttcgcaacgtggtgcgcactgtggcccaatttaaacaggcactccaccgg
atgcccgccacggaaggacctaccatcatcacgacagtggtgtcagtgagcggtgaccgg
ctgagccacgggagtgcagaccactccagtgaggtgaacggagaggatcacacgctgttc
gcacgcagcctcatcataggagatgccacggacaaccactgcagcacaggaggtcagtct
gaccagggctacggctctaaagatgagttgcatcaggagcaagtggatttggctcaatca
gcagcccctcttgtcgatgtggatcaccgcagcaagcccaaagcacagcacaatggtggg
gacatagctggctcggtggacagttctgtggtcgtagcggagcccaccagccctgttgaa
gccatcccacatgtccccagcatcgtcaagctgtccacaggagggagcttcgataccgcc
acgaagagaggagacactggcccagggaagctgttctctctgcgcagccagagtgaggat
gtctctctgccggaggagggtgagtctgcagccccgggtggctctggggaggaggggcct
gcagttcagggccagcgccagaaggccttctcggagcgcagctgcagcttcagcgtcgag
agtcgtgccggcatgctgatggagaaacatggcgtggaccacattgcgagacgcatgggc
gccgatgcccgaatcctcgccgctgccctttctgggtgtggcaccacccaaccgcctaca
aatctgccatccaaggccctttttaaggagttggagtcagaggggcgtggtccgatgctg
gggaaactgtcagaggagggttctgtactggacccaaccgcactggaggaggggctaggg
aaagaggagaagagaatggacggggaggatgagatgggactgaagttggaggaggaagga
gatttaggggggagtggtgatagctctctgccaaccctggagatgaaggaggtggaggtc
ggggctgatcccctctccctgctggtctcagagcacgaagagttggcgtccgtaaccagc
caggagctgccgcactccctgcccgccgtggtgtcccgaaacctggcagacgaaattgag
atgtacatgagcctgcgaagcccactgggccccaagtcctccagtatggagttccaccag
gggggccagggagggggctcttccccggacactgccccagttaagcaagctctagaacgg
aggtccagcctccctgtgccccctgtcaaacacccagggggttcaagcggggactcgacg
cccaaacgcagccctgccgctgtcacgcgctccaagaccttcaccggtatggccaccagg
agccccgcctcttccggcggtgttgtggccagcccgaggtcgtcactgacggcgctggtg
aggtcatcgcaaaacggctcgctgggctcggtcatcaactccatctcaggcatgaagatg
gacaccttgctctctggtcccaagatggacgtgttgaagtcaggcatgaagcaggcaggg
aacctggccagcaaagtgtggggggccgtggcctcagcctattcctactccgatgacgag
gatgagctggccccgggctacagggatagggatagtttccctgccgggctggatgagtcc
atgctgtcagggggtggaggggacagtcccacccacagagggccaacccaaggcctggtg
tccaacggactgacacagagcagcaccagcctggccagcagcagtagcagcagtgacaca
ggaagaggacctcactccacactgactccaggacggccagggagaggtccagactctgat
caaggctcccaccacaccagctcctcaagtatctaccaaaactgtgccctagaggtgctg
atgtccagctgctccctgtgtcggtcgtgtgagtgtctggtgtacgacgaggagatcatg
gcgggctggacggcagacgactccaacctcaacaccacctgtcctttctgccgcaccgcc
ttcctgcctctgctccacgttgagttccacgacctgcgcaccaacacagcgttctacctg
aagcccagtgcatcaggagacagtatccacagcgccagccaccagcccacaactacgggt
tccactgtgctcaaggtgggggctgcagcagacaccccgcgcctggacctcatcagcttc
ccagaatcctcctctgaggacccaggggaagccccggccagccaaaccgccactcacaag
agtttggtaccggtaccggagccggctcagtcggaccctctgggcttgctggaactccag
gcagggaagcgggggacgtctctgacgcgcagtaacagcgtgggcgggccactacagagc
ctggtctctgcccagagacaacccggacacggcgtgtccaccaccagcctgccctgcagc
ctgacagaggtggatggcctgggaccaaagcggcccaaccccatgccagtgtctgtgccc
tacctcagccccctggtcctccgcaaagaactggagaccctactagagaacgagggggac
caggtgatctacacccataaattcctgagtcagcaccccatcatcttctggaacctggtg
ttttatttctgtcgcctggacctgcctagctacctgcctggcctcatcctcacctcagaa
cactgcaacaacggagtacagctcccccagacctccctgtcccaggacagtaaacaggtg
tatgtgcagctgctgtgggacaacatcaacctgcaccaggagcctggcgatcccctctac
cagagctggaggaccctgctggagaagaagggcaccctggcccccacggaccatcaggag
acacggaccctcctcaacagcatcgtccgcagcatccagaccaacgacgtatacggcccc
atcaatctgctcctccgagaggtcaagcggcacccagaggtcaaacgccaaaggggtatc
tatagggagatcctcttcctggcgcttgtggcattgggacgggaggacattgatgtcgag
gcctttgaccgtgaataccgcctggcctttgatgatctgagcacagagcagctcaagacc
ctgcacaagattgaccggccacccaacagcaatgtccagtggtgcctcaagtgctttgga
gctccagtcatctga
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