Salvelinus namaycush (lake trout): 120049657
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Entry
120049657 CDS
T07522
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120049657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049657
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120049657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
120049657
NCBI-ProteinID:
XP_038851921
UniProt:
A0A8U0QWM3
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All DBs
Position
Sna6:complement(12960558..12987867)
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AA seq
1042 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSSPAQPLYGHYGGQPQSFPAPPTGLMKPVSSPS
CMPPPEVSSQYGSNGQQNGAYPQRYPAAAAASPYGQPPNSPYHSMAPQAPAQQLTNQMGS
MNLGYGPGPMQSPQAPPTSPPAQQPFQTAPPPTMGQSTLGPHSPQMAPPQSPLAGPSMGG
HPSMGGHPSMGGHPSVGGHPPMGGMGRPFPGPPPPGTGGFQQPGPGAAGQPGYPQQPQGQ
FGGQMAGPGMAEPFQGGAAHMSGPPQKKLDPDSIPSTTQVTEDDQAKRGGQVYTTNLRGQ
VPPLVTTDFTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLGAIIKPFATVPKNETPL
YVVNHGETGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPAFFFQHLDHMGRRVD
LYERPELSLGSYEFEATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCEELKTLLD
NLPREDGAESSAVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQ
ESRAVINNLLDQIPDMFADTNESETVFAPVIQAGVEALKTAECSGKLFIFHSSIPTAEAP
GKLKNRDDKKLINTEKEKTLFQPQKGVYEQLSKDCVSQGCSVDLFLFPSQYVDLATMGDV
PTHTGGSIFKYSNFQVEMDGEHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATNFFGAIHM
NNTTDVEMAAVDCDKAVTVEFKHDDKLSEETGALMQCALLYTTVSGQRRLRIHNLSLNCS
AQLSELYKSCETDALINFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCASPSAA
SQLILPDAMKVFPVYLNSLMKTGPLVGSAELSTDDRAHQRLITTAMGVEDTQLLLYPRLV
PLHNMDVASDLVPAPVRCSEERLTDAGMFLLENGRSLFLWLGQACPPELVQRVFNVPSFA
HVPADLSSLPVLDNPQSKKLRSIIDSLLDQRPSAMKLLIVKQKDRSEMLFRQHLVEDKGL
HGGASYMDFLCYVHTEIRQVLT
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacgcctccatactcccaggcccagcctgggatgggg
ggctacccagctgggtttgggagttcgcctgcccagcccctctatggacactatggggga
caacctcagtcattcccagccccaccaacaggtttgatgaagcctgtgtcatccccctcc
tgcatgcctccaccagaggtctccagccagtatggctcaaacggtcagcagaatggcgct
taccctcaaaggtaccctgctgctgctgccgcctctccgtatggacaaccccctaattcc
ccctaccacagcatggccccccaggccccagcacagcagctcaccaatcagatgggttcc
atgaaccttggatatggtccagggcccatgcagagccctcaggcaccccccacctctccc
ccagcccagcagccattccagaccgcccctcccccaaccatgggacaatcaaccctgggc
ccccattcaccccagatggctcccccacagtcgcccctagctggcccatctatgggaggg
cacccatctatgggagggcacccatctatgggagggcacccatctgtgggagggcaccca
cccatgggaggcatgggtaggcccttcccaggcccaccccctccaggcactggaggcttc
cagcagcctggacctggagcagccggacaaccaggataccctcagcaaccacaaggtcag
tttggggggcagatggcaggacccgggatggcggaacccttccaaggtggggcagcccat
atgtccgggccacctcagaaaaagctggaccctgactccatccctagtacaacacaagtc
actgaggacgaccaagccaaacgagggggacaggtgtacaccacaaacctcaggggtcag
gttcccccgctggtcactactgactttactgtacaggaccaaggaaatgccagtccaagg
ttcatgcgttgcaccacctactctttcccctgcacggctgacctggccaagcagtgccaa
gttcctttgggtgccatcatcaaacctttcgccacggtgccaaagaatgagactcctctc
tacgtcgtgaaccatggtgagactggcccgatccgctgtaaccgctgcaaagcctacatg
tgtccctacatgcagttcatcgatggcggccgccgctaccagtgcggcttctgcaactgc
gtcaacgaagtgccagccttttttttccaacacctggaccacatgggcagaagggtggat
ttatatgagaggccagagctgtcgctggggtcctatgagttcgaagccaccctggattac
tgcaagaacaacaagccagctagtcctccggcgtacatcttcatgatcgacgtgtcctat
gccaacatcaagagcggactggtcagactggtatgtgaggagctgaagaccctgctagac
aacctgcccagagaggatggtgccgagagctcggcggtgaaggtgggcttcgtcacttac
aacaagatcctacacttctacaacgtgaagagtgccctggcccagcctcagatgatggtg
gtgtccgacacggccgagatgtttgtcccactgctcgacggcttcctcgtcaacttccag
gagtctcgcgccgtcatcaacaatctcctggaccagatccctgatatgtttgcagacacc
aacgagagcgagacggtctttgcccccgtcatccaggctggggtagaggcactcaagaca
gcagaatgcagtggcaagctgttcatcttccactcatccatccccaccgccgaggcccct
gggaaactaaagaacagggacgacaagaagctgatcaacacagagaaagagaagactctg
ttccagccccagaagggtgtgtacgagcagctctccaaggactgtgtgtctcagggttgc
agcgtggatctcttcctcttccccagccagtatgtggacctcgccaccatgggagacgtc
cccacacacacaggaggctccattttcaagtacagcaacttccaggtggagatggatgga
gagcatttcttgagtgacctgaggaaggatgtggagaaggccatcgggtttgacgccatc
atgagagtccgtaccagcacaggcttcagggctacaaacttcttcggtgctatccacatg
aacaacaccacagacgtagagatggctgccgtggactgtgacaaggctgtgactgtggag
ttcaaacacgatgacaaacttagcgaggagacgggcgcactcatgcagtgtgccttgctg
tacacgaccgtcagcggccagcgtcgtctgcggatccacaacctcagtctgaactgcagc
gcccagctgtctgagctatacaagagctgtgagacggacgccctcatcaacttcttcgcc
aagtcagcataccgtgccatgctgaaccagcccctgaagacggtgagggagattctggtc
aaccagacggcccacatgctagcctgctacaggaaaaactgtgccagtccctccgctgcc
agccagctgattctgcctgatgccatgaaggtgttcccagtctacttaaacagcctgatg
aagactggtccattggtgggcagcgctgagctctctacagacgacagggctcaccagaga
ctcatcaccacggccatgggggtggaggatacccagctgctgctctacccacgccttgtc
ccactgcacaatatggatgttgccagtgatctggtgccagctccagtgcgctgttctgag
gagcgcctgacagatgctggcatgttcctgctggagaatgggcgctccctcttcctgtgg
ctgggccaggcctgccccccagagttggtccagagagtcttcaatgtgccctccttcgcc
cacgtgcccgctgacctgagctccctgccagttctggataacccacagtctaagaagctg
cgttccatcattgactcattgcttgaccagaggcccagcgccatgaagcttctgatcgtg
aagcagaaagaccggtctgagatgctgttccgccagcacctggtggaggacaaggggctc
cacggtggagcctcctacatggacttcctgtgctacgtccacaccgagatcagacaagtc
ctcacttaa
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