Salvelinus namaycush (lake trout): 120049662
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Entry
120049662 CDS
T07522
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120049662
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120049662
Factors involved in mRNA localization
Other mRNA localization factors
120049662
mRNA cycle factors
Stress granule specific factors
120049662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120049662
NCBI-ProteinID:
XP_038851929
UniProt:
A0A8U0R1Q9
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Position
Sna6:complement(14105623..14133404)
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AA seq
704 aa
AA seq
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MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEVSQGLFYVIEYAACDATYNEIVTHERIRPV
NPNSPSSRNSFHKVPIAIPEDLRNICANDNIHKDFRKAIGANCIFYSAASHELIVLSTNE
TTVKRAALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIG
SHGANIQQARKVPGVTAIELEEESCTFRIYGENPEAVKLARVFLEFKEDYFQVPRNLVGK
VIGKNGKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGREDTAPKQEGMVPFVFVG
TKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRVGGAGPGDREK
GYLTDESSNSTNLHTSRTYGGRGRGRRPSNSQYSGYGTNSEQSNASESEDLNERDQRPRG
VGGDERGSRRGGRGRGANTGRGRGGPASRTTNSISSVLRDPDSNPFSLLEGESEQGDTDT
SEGVGGVDRRRRSRRRRNDQEPSVMDAAATESDSQAGPNENGLDEEGRPQRRNRSRRRRN
RGNHPEGGSLSRDRQPAEGEQCVRRPKPPSLLSVWTLEENVTVADYISRAESQSRQSLPL
ETLAASEPKENGSSTKKEELTAPSKRSPSNGMAMPSETLVNGVS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggcggtggaggttcgcggctcgaacggggccttctacaaggggttcatc
aaagatgtccacgaagactcactcacaatagtattcgaaaacaactggcaaccagagaga
cagctgcccttcagtgacgttcggctgccgcccccagccgactaccacaaggacattggc
gagggagaggaggtggaggtgtactcgagggccaacgagcaggagccatgtggctggtgg
ctggcccgggtgagaatgatgaagggagaggtgagtcagggactgttctacgttatcgag
tacgcagcgtgcgacgccacatacaacgagatcgtcacgcacgaacgcatccggcccgtc
aaccccaacagtccttcctcccgaaactccttccacaaggtccccatcgccatcccagaa
gacctacggaacatctgtgcgaacgacaacatccataaagacttcaggaaagccattgga
gccaactgcatcttctacagtgcagcctcacacgagctcatcgtgctgtcaacaaatgag
acaacagtgaagcgtgctgctctcctaagcgacatgcacttccgcagcatccgtaccaag
ctcatgctcatgtcccgcaacgaagaagccactaaacaccttgagacaagtaagcagctg
gcatctgcgtaccaggaggaggtgaaggtaagggaagacctgatgggtctggccattggc
tcccacggtgccaacatccagcaggccaggaaggtgcctggtgtcaccgccatcgaactg
gaggaggagagctgcaccttcaggatctacggagagaacccagaagcagtgaagctggcc
agggttttcctggagttcaaagaagactacttccaggtgccccggaacctcgtaggaaaa
gtgatcggcaagaacggcaaagtcatccaggagattgtggacaagtcgggggtggtgcgg
gtccggatcgagggggacaatgacaaaaagcttccccgtgaggaggtaggcaggcagggg
gctggcagagaagacactgcccctaaacaagagggcatggttcccttcgtctttgtggga
actaaagagaacatcagcaacgcccaggccctactggagtaccacgtggcctacctacag
gaagtggagcagctgcgtctggagcggctgcagattgacgagcagctccgtcagatcggg
gtggggtaccgtgccccccctagtcgggtcgggggcgccggccccggggacagggagaag
ggctacctgacagacgagagcagcaactccaccaacctccacacctcgcgcacctacgga
ggccgcggacgaggacgcaggccctccaacagccagtactctggatatggtactaactct
gagcagtccaacgcttcggagtcagaggaccttaacgagcgcgaccagcggccccgaggc
gtgggcggagatgagaggggttcccgtcggggtggcaggggccgtggagccaacaccgga
cggggtcgcggaggacccgcctcaaggactaccaactcgatcagctcagtgctgagggac
ccggacagcaacccattctccctgctggagggtgagagtgagcagggcgacacggacacc
agcgagggagtgggaggagtagaccgcaggagacgctcccgccgtcgccgtaacgaccag
gagccgagtgtgatggacgccgccgccacagagtcagacagccaggccggacccaacgag
aacggactggatgaggagggccgaccccagcgccgcaacaggagccgccgccgccgtaac
cgcggcaaccaccccgagggaggatccctcagccgtgacagacagccagccgagggtgag
cagtgtgtcagacgtcccaaacctccctccctgttgtcagtctggaccttagaggaaaat
gtgaccgtggcagactacatatcccgcgccgagtcgcagagccgacagagccttcccctg
gagacacttgctgcttccgagcctaaggagaacgggagcagcaccaagaaggaggagctc
acggcgccctccaagcgttcccctagcaacggcatggccatgcccagcgagaccctggtc
aacggcgtctcgtag
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