Salvelinus namaycush (lake trout): 120049692
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Entry
120049692 CDS
T07522
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120049692 (lrrk1)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120049692 (lrrk1)
Protein kinases [BR:
snh01001
]
Serine/threonine kinases: TKL group
LRRK family
120049692 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
COR-B
Roc
Ank_2
COR-A
LRR_14
Ank
Ank_3
Ank_4
Ras
Arf
Beta-prop_LRRK2
LRR_9
Ank_KRIT1
Gtr1_RagA
zf-BED
Motif
Other DBs
NCBI-GeneID:
120049692
NCBI-ProteinID:
XP_038851972
UniProt:
A0A8U0QYR3
LinkDB
All DBs
Position
Sna1:80046694..80230636
Genome browser
AA seq
2072 aa
AA seq
DB search
MSYWSVGLSKATGGAQSNNMEEQEKQDLEQDGSLAVEDMGAKASAMGSGGASSLGPSPTL
ENIQAAYGEGESSRARELIQQACCVECSAASPRLEGLRLLCVATQYGDAESVSYLLHEAR
VPLPLEPSEGNPAILATHYGHVSLVRELLDSLPGPCVHRDLLNWMLVSACQQGHLEVVRM
LVQSYHADVEDCAIHQEEFAVITGLPLYAAARAGNEEIARFLLQNGAGLSSYTLMDYPAF
SRLLVEQRLVEEADTHTEPAGEKLLCGRWSGLKLPWLELDWFMDVSSRISHLDLSCNSLS
SLPSVVPWGLIQLRTLDLSNNLFKELHTAQSSQEIICSRLRQVNLSQNELTSLPSGLLHL
TRVQRLSAAKNKLTSLFDIPNGTNWIGLRKLEELDVSDNCLTSLPSAVLHSFKSLTSLKV
CRNRLTSFPDPWACPLKHCRASSNAIESLPNTISIFWRTQLQEVDFSDNVIKELPSYIFE
LEALVSLRLCRNQISTLPAPNKWKCSLLRTLDLSRNQLGKTEEGPKTRKLAFLTTWHRRD
PDPVCPIEFPVILRDALEVLSLNDNQLECVPQSVCGLRNLMELYLSNNPGIRELPAELGQ
LSNLWQLDIEDLNITNVPQDIRKDGPASVLSFLRANLRKAEPCKLLKLLVIGPPRQGKTA
LLEALQTGRTSPFSPAERNISTATWELDRPNGVKASADSVAFNVWDIGGPANMSTVNQCF
FTDKALYVVIWNLALGEEAVASLQSWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERVAT
LRAYILALCRSPSGARASGYPDITWKHLHEVSCKTQEGLDGLKRLIFQVACYMKDNSSSS
ASGHKLLGRLIPKSYLTLQQAVLDERGRRDAEDEVQYLTDAQLDLVIEQNPGSDIRDYED
LQTAISFLIETGTLLHFPDTSHGLCTLYFLCPVWLSECLERIIHLKSSRSVAWNGVIRAE
DLRMLLVGTGFTQQTEEQYFQFLAKFEIALPVASDSYLLPHLLPPKPAMDIHGFRQETAN
SIQRLFKMSFVPAGFWERFIARMLISLTEMDLQSFEPKKNAKSERRRTTVIYSFAGTGSQ
QRNRCSTFRVRRSQTIYWREGLLVTFDGGYLSVESTDVNWKRKKSGGIKIICQSETRDFS
AMAFITDHVNSLIEQWFPALTASESDGTRLIEQYAPCPQCSSMSRQNQGPGGLGEPPTRG
TAAGRRGGEGREKGGGRGGHFFNMEDCVIAAMGQEYIVCPQHPDQPVPLQELVPELFMTD
FPSRLFLEKALLECSEEESDILGQGGSGTIIYRACYRGQPVAIKRFHFKKCRQQTISSGT
DTMMKHLQSMHACRSFSEFRQEASMLHSLQHPCIVPLVGISIHPLCFALQLAPLGSLNIV
LEDRHKGSRYMPLGHMLTFKAAYQIAAGLVYLHRKNIIFCDLKSDNILVWSLEVCDPVNI
KLSDYGISRQSFHEGVLGVEGTPGYQAPEIRPGIVYDEKVDMFSYGMVVYELLSGCRPAL
GQHQLQIAKKLSKGIRPTLGNPEEVQFHCLHGLMIECWDTKPEKRPLAMQCVRQMQEPSF
PCLRYLLACDTHSQLFLSHLQGHSAVFWDGDKDDRNYSVVNVEKGQVEVKRMPCPGTRLS
CQMKMDNTLWTATEEQEVFIYSLKEMCPLSQPQKQISCPAIVTCLFPVPARDQTQACVFM
GMSDGLVAVYSLMDDMPVEGETYLCSHTLNTTMFGMEDSDPRQRPYPVRSMVLVHSGSQL
WYSHGPGLLVIDCRTLQAVRRLDPYDPPSSIQALASSPCLWGDEAVWTLDDHTNTLQLYH
AATYQLCATYSCGDANPLRDVFTVQRPAGVTMDISPDLDSQRKSLDEEEEEEECPNGKVT
LIYSEEAGTQIIQHQDSLTDYCSMSSDSTPSLGFDRSGPLSEPLGLDRSSSCALSSLASS
SSMPFSTEEEERPQEERPQDHPDDSDSVVNSDPTTTFTTTPPHLQALTVLAVNGTLWIPR
RGGDVMVIEVQRQTGQLRGRVIAVLCPPGTSSYGTLEEAALVAKDTVVCGFRNENRAWCL
CVWRGWGPRELEVFYQSYEELGRLETSMRKRR
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactggtcagtcggcctctccaaggccactggaggcgcacagagcaacaacatg
gaggaacaagagaaacaagatcttgaacaagatggttctttggcagtggaggacatggga
gccaaggcgtctgcgatgggcagcggtggagcctcctctctgggtccgtctccaaccctg
gagaacatccaggcagcgtacggggaaggggagagcagcagggcccgggagctgatccag
caagcctgctgtgtggagtgtagtgcagctagtcctcggctggaggggctgcgtctcttg
tgtgtggccacccagtatggtgatgcggagagcgtgagttacctcctccatgaggcccgt
gtgcccctgcccctggagccgtcggagggaaaccctgccatcctggctacacactatgga
catgtcagcctggtcagagagctgctcgactcactaccaggtccatgtgtccacagagat
ctgctgaactggatgttggtgtcggcgtgccaacagggtcacctggaggtggttagaatg
ttggtgcagagttaccatgccgacgttgaggactgtgccatccaccaggaggagtttgct
gtcatcacggggctgcctctctacgctgctgcacgcgcaggtaatgaggagatagctaga
ttcctgctgcagaatggcgctgggctgtcctcctacaccctgatggattatccagccttc
agcagactgctcgttgaacaacgactggtagaagaagcagacacacacacagaaccagcg
ggagaaaagctactatgtggccgttggtcaggtctgaagctgccgtggttggagctggac
tggttcatggacgtgtcgtcccgtatctcccacctggacctgtcgtgtaacagcctcagc
tccctgccctccgtggttccctgggggctcatacagctccggaccctagacctctccaac
aacctgttcaaagagctgcacacagcacagagctcacaggagatcatctgttccagactt
cgccaggtgaatctgtctcagaatgagttgaccagcctgccgtccggactgctccatctc
accagagtccagaggctctctgctgctaagaacaagctcacctccctatttgacattcct
aatggtactaactggatcggtctgcgtaagctggaggagctggatgtgtctgacaactgt
ctgaccagtcttccctctgctgttcttcactctttcaaatccctcacttccctcaaagtc
tgccggaacagactcaccagcttccctgacccctgggcctgccctctgaagcactgtcga
gcctcatccaacgccatcgagagtcttcccaataccatctccatcttctggagaactcag
ctgcaggaggtggatttctcggacaacgtcatcaaggagctgccctcctatatattcgag
ctggaggccctggtctctctcagactgtgtaggaatcagatctccactctcccggcaccc
aacaagtggaaatgctctctgctcagaacccttgacctctccaggaaccagctgggcaag
actgaggagggacccaaaaccaggaagctggccttcctgaccacatggcaccggagagac
ccggacccagtatgcccaatcgagtttccagtaattttgcgggatgctttggaagtgctt
tccttgaacgacaaccagctggagtgtgtcccccagtccgtgtgtggcctgagaaacctc
atggagctctacctctccaataatccaggtattcgggaacttccagctgagttggggcag
ctctctaacctgtggcagttggacattgaggacctcaacattactaatgttccgcaggac
atcaggaaagatggtccagcatcagtgctgtccttcctccgagccaacctacggaaggcg
gagccctgtaagctgctgaagcttcttgtgattggtcctcctcggcagggaaagacagcc
ctcctggaagcattacagacgggcaggacctcccctttctcccctgcagaacgaaacatc
agcacagctacttgggaactggacagacccaatggggttaaagctagcgcggactccgtg
gcgttcaacgtgtgggacatcggcggtccggccaacatgtccacggtcaaccagtgtttc
ttcacggacaaggccctgtacgtagtcatatggaacctagctctgggagaggaggctgta
gccagtctacagtcctggctgcttaacattgaggcgcgtgcccctaactctgcggtggtg
gtggtgggcacccacctggacctgatcgacaccaagttccgtacagagcgggtggccact
ctgagggcctacatcctggcactatgcaggtctccatcaggcgccagggccagtggctac
ccagacatcacctggaaacacctgcatgaggtatcgtgtaagacccaggagggtctggat
ggtctgaagaggttgatcttccaggtggcctgctatatgaaggacaacagcagcagttca
gctagcggacacaaactgctgggcagactgatcccaaagagctaccttacactacagcaa
gcggtgctagatgagcggggtcggcgggacgcagaagacgaggtccagtacctgacagac
gcacagctggacctcgtcatagagcagaacccaggaagtgacatcagagactacgaggac
ctgcagaccgccatcagcttcctgatcgagacaggcaccctcctccacttcccagacacc
agtcacggcctgtgtaccctctacttcctctgtcccgtgtggctgtcggagtgtctggag
cggatcatccacctgaagagctcccgatcggtggcctggaacggggtgatccgagcggag
gatctgcgcatgctcctggtgggaacaggcttcacccagcagacggaggagcagtacttc
cagtttctggccaagtttgagattgctctgcctgtggccagcgatagttacctcctcccc
cacctccttcctcctaaacctgctatggacatccacggcttccgtcaagagaccgccaac
tccatccagcgcctcttcaagatgagcttcgtgccggcgggattttgggaacgcttcatc
gcccgcatgctcatcagcctcaccgagatggacctccagtcctttgagcctaagaagaat
gctaagagtgagcggaggaggaccacggtgatctacagttttgcgggaacaggtagccaa
cagaggaaccgctgtagcaccttcagagtccgccgcagtcagaccatctactggagagag
ggactactggtcacctttgacggagggtatctaagtgtggaatcgactgatgtcaactgg
aagaggaagaaaagcgggggcatcaagatcatttgccaatcagagaccagggatttttca
gccatggccttcattacagaccatgtcaattccctcatcgaacagtggttccctgccttg
acggccagtgagagtgatgggacccgattgattgagcagtacgccccctgtccccagtgt
tcctccatgagcagacagaaccagggacctgggggtctgggggaacccccaactagaggg
actgcagctgggagaagaggaggagaaggcagagaaaaagggggaggaagaggagggcac
ttcttcaacatggaggactgtgtgatcgctgccatgggccaggagtacatagtgtgtccc
cagcaccccgaccagcctgtcccccttcaggagctggtcccagagcttttcatgaccgac
ttcccctcacggttgttcctagagaaggccctgttggagtgtagtgaggaggagagtgat
atcctgggccaggggggcagtggaactatcatctatagagcctgttaccgtggccaacca
gtcgccatcaaacgctttcacttcaagaagtgcaggcagcagaccatcagcagtggtaca
gacaccatgatgaagcaccttcagtccatgcacgcgtgccggagcttctcagagttccgc
caggaggccagcatgctccactccctgcagcacccgtgcatcgtgcccctggtgggaatc
agtatccacccgctctgcttcgccctgcagctggctcccctgggcagcctcaacattgtg
ctggaggacagacataaaggctccaggtacatgcccctgggtcacatgcttaccttcaag
gcagcctatcagatcgcagcggggctggtctacctgcacaggaagaacatcatcttctgt
gacctcaagtcagacaacatcctggtgtggtccctggaggtgtgtgacccggtgaatatc
aagctgtcggactacggcatctcgcgccagtccttccatgagggggtactgggggtggag
ggcacgccggggtaccaggcccccgagatacgcccaggcatcgtttatgatgagaaggtg
gatatgttctcgtatgggatggttgtgtatgagttgctgtcaggttgtaggcctgcgttg
ggccaacaccagctccagatagctaagaagctgtctaaagggatccgtcccaccctggga
aacccagaggaagtccagttccactgtctgcatggcttgatgatcgagtgctgggacact
aagcctgagaagaggcccctggccatgcagtgtgtgaggcagatgcaggagcccagcttc
ccatgtctgaggtacctgttggcctgtgacacacactcccagctcttcctgtcccacttg
cagggacacagcgctgtcttctgggacggggacaaggacgacaggaactacagtgtggtg
aacgtagagaagggtcaggtagaggtgaagaggatgccgtgtccaggaaccaggctgagc
tgtcagatgaagatggacaacaccttatggaccgccacagaggagcaggaagtgttcatc
tacagtctaaaggagatgtgtccactgagccagcctcagaaacagatctcctgtcctgct
atagtcacctgtctgttccccgtgcccgccagagaccagacccaggcgtgtgtcttcatg
gggatgtcagacggtctggtggctgtgtactccctaatggatgacatgcctgtagaagga
gagacctacctgtgttctcacaccctcaatacgaccatgttcgggatggaggactctgac
cccagacagagaccctacccagtcaggagcatggtcctggtccacagtggatcccagctg
tggtactcccatggtccaggcctgctggtgatcgactgccggaccctccaggcggtgcgt
cgtctggacccctacgacccaccatcctccatacaggccctggcctccagcccctgtctg
tggggggatgaggcggtgtggaccctggacgaccacaccaacaccctgcagctgtaccac
gctgccacctaccagctctgtgccacgtacagctgtggagacgccaaccctctccgggac
gtgttcactgtacagcgacctgcaggggttaccatggatattagtcctgaccttgactca
cagaggaagagtctagatgaggaggaggaagaggaggagtgtcctaacggcaaagtgacg
ctgatctacagtgaggaggcggggactcagatcatccagcaccaggattcgctgacggac
tactgctccatgtcctctgactccaccccttcgctgggatttgaccgatccggccccttg
tcagagccactgggattggacagatccagttcctgcgcgctcagctcattggctagttcc
agcagtatgcctttttccactgaggaggaagagaggcctcaggaagagaggcctcaggac
cacccagacgactctgactctgtggtgaactctgaccccaccacaacctttaccaccact
cccccccacctgcaggccctcactgtgctggctgtcaatggaaccctttggatccccagg
aggggtggtgacgtgatggtgatcgaggtccagcggcagacaggacagctcagggggcgt
gtcatcgctgtgctctgcccccctggaacttcctcttacgggaccctggaggaggccgca
ctggtggcaaaggacacggttgtgtgtggctttcgcaacgaaaatagggcctggtgcctg
tgtgtctggcggggctggggcccccgtgagctagaggtcttctaccagtcctacgaggag
ctggggaggctggagactagcatgaggaaaagaaggtag
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