Salvelinus namaycush (lake trout): 120049701
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Entry
120049701 CDS
T07522
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh01100
Metabolic pathways
Module
snh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120049701 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120049701 (chsy1)
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120049701 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
120049701 (chsy1)
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120049701 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Phage_TAC_13
DUF7164
Motif
Other DBs
NCBI-GeneID:
120049701
NCBI-ProteinID:
XP_038851984
UniProt:
A0A8U0UH30
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All DBs
Position
Sna1:complement(80257755..80369575)
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AA seq
800 aa
AA seq
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MAGRSRRAWFSVLLGLVVGFTLASRLILPKATELKKSGQKRKANPAGCGLNGGLRREYGG
VLWPPQDNGFSATEKPVPRSNNFLYVGVMTAQKYLNNRAIAAHRTWAQTIPGHVEFFSSE
GSDTTIPIPIVALHNVDDSYPPQKKSFMMLKYMHDHYLDQYEWFMRADDDVYIKSERLEG
FLRSLNSSEALFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHISQCL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIAQLRHRTVQLHREIVQMGRYGAAEPSREDLQLGMPPSFM
RFHPRLREEVLEWEFLTGKYLFSSSDGQPPRRGMDSSQRLALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFR
EEEEMDAKALASSINQDSDSLSFLSNSLKMFVPFKLSSSSQDQKEPKEPKVNILVPLSGR
YDIFVRFMTNLERVCLIPNQNVKLLILLFSTDNNTERVKQVELMREYHIKYPRAEMEIQP
VSGSFSRALALEVGSAHFSNDSLLFYCDVDLLFTTDFLKRCRGNTVLGEQTYFPIIFSQY
DPKVVYAGKVPSENHYVFTAKTGLWRHYGFGIVCVYKGDLVGAGGFDTSIQGWGLEDVDL
FNKFVQSGIRLFRSTDPGIVHVHHPVVCDPNLEPNQYKMCLGSKASSHGSTQQLAELWLE
KNDHGFRKVGSSNNESLRTA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagccgaagagcatggtttagtgttctgttggggctggttgtcgggttc
accctggcttccagactcatattaccgaaggctacggagctgaagaaatccggtcagaaa
cgcaaggcgaacccagccggttgcgggttgaacgggggtctgaggagagaatacggtggg
gtgttatggcccccgcaagataacggattttcggcgaccgagaagccagttccgaggtcc
aacaatttcctttacgtcggcgtcatgactgcccagaagtacctgaataaccgcgccatc
gcggcacatagaacgtgggctcagaccatcccgggccatgtggagttcttctccagcgag
ggttcggacaccaccattcccatccccatcgtggcgctgcacaacgtggacgactcctac
ccaccgcagaagaagtccttcatgatgctcaagtacatgcacgaccactacctggaccaa
tatgagtggttcatgcgggccgacgatgatgtgtacatcaagagcgagcgcctggagggc
ttcctgcgctcgctcaacagcagcgaggccctcttcctgggccagacgggcatgggcgcc
cgcgacgagctgggcaagctggcgctggagcccggcgagaacttctgcatgggtggcccc
ggcgtgatcatgagccgcgaggtgctgcgccggatggtgccccacatcagccagtgcctg
caggagatgtacaccacgcacgaagacgttgaggtgggccgctgcgtgcggaggtttgcc
ggcgtgcagtgcgtctggtcctacgagatgcagcagctgttctacgagaactatgagccc
aacaagaagggatacatccgcgacctccacaatagcaagatccaccgggccatcaccctg
caccccaacaagaacccgccttaccagtaccgcctgcacagctacatgctcagccgcaag
atcgcccagctccgccaccgcaccgtccagctccaccgtgagatcgtccagatgggccgc
tacggggcggccgagcccagccgagaggacctgcagctgggcatgcctccatccttcatg
aggttccaccctcggctccgcgaggaggtcctggagtgggagttcctgacgggcaagtac
ctgttctcctcgtctgacggtcaacccccccgccggggaatggactcctcccagcgtctg
gccctggatgacatcatcatgcaggtgatggagatgattaacgccaacgccaagacgcgg
ggacgagtgattgacttcaaggaaatccagtacggctaccggcgggtcaaccccatgtac
ggggcggagtacgtgctggacctgttgctcctctacaagaagcacaaagggaagaccatg
acggtgccggtgaggagacatgcctacctccagcagaccttcagccagatccagttcaga
gaggaagaggagatggacgccaaggcgcttgccagcagcatcaaccaggactctgactcc
ctgtccttcctctccaactccctcaagatgttcgtgcccttcaagctgtccagctctagc
caggaccagaaggagccgaaggagcctaaggtcaacatactggtgccgctatccggacgc
tacgacatctttgtccgcttcatgaccaatttagaacgggtgtgcctgatccccaaccag
aacgtcaagctgctcatcctcctcttcagcaccgacaacaacacagagcgggtcaagcag
gtggagctgatgagggagtaccacatcaagtacccccgtgccgagatggagatccagccc
gtgtcgggctccttctcccgggccttggctctggaggtgggctcggcccacttctccaac
gactcgctgctcttctactgcgacgtggacctgctcttcacaaccgacttcctcaagagg
tgccggggtaacacggttctgggggagcagacctacttccccatcatcttcagtcagtac
gaccccaaggtggtttacgccggcaaggtgcccagtgagaaccactatgtgttcaccgcc
aagacgggtctgtggcgtcactacggcttcggcattgtctgtgtttacaagggcgacctg
gtcggggccgggggcttcgacacctccatccaagggtggggcttggaggacgtggacctc
tttaacaaatttgtccaatcagggatccggttgttccggagcacggacccggggatcgta
cacgttcaccatccagtagtgtgcgaccccaacctggagcccaaccagtacaagatgtgc
ctgggctccaaagcctcgtcgcacggctcgacacagcagctggctgaactgtggctcgag
aagaacgaccacggcttccggaaggtcgggagctcaaataacgaatccctcaggacagcg
tga
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