Salvelinus namaycush (lake trout): 120049748
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Entry
120049748 CDS
T07522
Name
(RefSeq) RNA-binding protein 4B-like isoform X1
KO
K13189
RNA-binding protein 14
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120049748
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120049748
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120049748
NCBI-ProteinID:
XP_038852062
UniProt:
A0A8U0QYX2
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Position
Sna6:20323532..20332670
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AA seq
612 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFESYGQVVSCSVLRQFAFVHLQGEGAAERAISEL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKPSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
HTTGTRTDGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYARSMNP
SHAALYSQLSQIAASPAAAYSTPVYAHAMANHHHHPGAVYLAAPGVEMPTTAAAINQAYA
LAPALYGGAQHAYGHMGMGAMSVSADPSAAIFEAARVQHYFAQGQQVLAEQQNAAAAQAA
KSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEEAEAAEDPMTR
EQYQQYAEYYQQQHQQYQQLQQLQYYAEYYQQYQQYQQLQQYQQLQQLQYAYPPPNHHAI
PAHAIAGHAHHHGQPGHVTALDAALRPVVPASAMVAVPRVYESPLPPPPNRKEAVLRRAP
EISLHTPEPPFR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctggacaccacccag
gaggagctgtcggccatctttgagtcgtatggccaggtggtcagctgcagcgttctccga
cagttcgccttcgtacacctacagggcgagggggctgcagagcgggccatcagtgagctg
aacggcagggagttccgggggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgtttgtgggcaacctgtcgggcatgtgcaccactgaggatctccag
gagctcttccagaccttcggcaaagtactggagtgcgacaaggtcaaagccaggctctcc
tcttctgcaggatacgcctttgtgcacatggagaataaggaggaggctctacaggccatc
gaggccctccacggcacctccttcaagggacgccctctctccgtggagctctccaaggta
cagccttctaagcaaacccccactgggaagatcccttgtgtgagctgtgggaagcagggc
cactacgctggggagtgccctgtagggaagccctctctggaacagtaccagagccaggca
gccgtgttagctgcagccgccgccgccgcagccggcctcccccttcaggtccagcagagt
gtccacaactctgtctacaacacctcaacctttgaccccacatacgctgcgctgacgggc
cacaccaccggcacgcggacggacggcaaccccgtcaaccaggcagtgtacggtgccctg
gcgacgcaggtgtacggcgccaacgtggccaatcagctctacggagtccaggcagcaaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtatgccaggtccatgaacccc
agccacgccgccctctacagtcagctcagtcagatcgctgccagccccgccgctgcctac
tccacacccgtctacgcgcatgccatggccaaccaccaccaccacccaggggccgtctac
ctggcagcccctggcgtagagatgcctacgaccgctgctgccatcaaccaggcctatgcc
ttggcaccggcgctctatgggggtgcccagcatgcctacggtcacatggggatgggagcc
atgagcgtgtcggcggacccgtcggctgccatttttgaggcagcgagggtgcagcactac
ttcgcccagggacagcaggttctggccgagcagcagaatgcggcggcggcccaagcggca
aagtccggggaaagggaccggagtcccctgaggcgctcggcggggtccctgctgcccgac
cctgtcatgaagcccttcatgtaccagagagcgcccaagcaacgccggccgctgctcccc
acccccgctgggcgagctgcagaggaggaagcggaggctgcggaggaccccatgactaga
gagcagtaccaacagtatgctgagtactaccaacaacagcaccaacagtaccagcagctc
cagcagttacagtactatgcagagtattaccagcagtaccagcagtaccagcaactccaa
cagtaccagcaactacaacagctccagtatgcctacccacctcccaaccaccacgccatc
cctgcccacgccattgcgggccacgcccaccaccacggccagcccggtcacgtcacggcg
ctggacgccgccctcaggccagtggtgcccgcctccgctatggtggcagtgcccagagtg
tatgagtcgccgctgccgccgccaccgaaccgcaaggaggccgtcctccgccgagccccc
gaaatctcccttcacacgcctgagccccccttccgatag
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