Salvelinus namaycush (lake trout): 120049749
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Entry
120049749 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120049749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049749
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120049749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
120049749
NCBI-ProteinID:
XP_038852068
UniProt:
A0A8U0QZD3
LinkDB
All DBs
Position
6:20401717..20425509
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AA seq
1415 aa
AA seq
DB search
MSLRPPTSTLDRLSSLTIGDSERKTSSGQQREPLADFPTESTGQGLVQRCVVVQKDQLGF
GFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSGTYVAL
TLQGPPPSATALPLHPLTTDLLPNQRTSLGGEAPPPPPPPLSPGLTSTPPQRITKPLQNL
DVQKHATQILRNMLEQGEAELQDLMEELLLNPSPSLEERIESAKRRAQQVRVKIQQDLDG
TRLDAVTSYVVAGEGRLSGDSSEGDFEACESPHSSPSTSSFRTPLYRRQGSDTHTFSDSA
GKAQIIGPEEEEEEDDSYPLNDMDGPFQDIELLKSRPAHMTVFMRYLFSQLLDPNPLLFY
LSVEAYLGSSPKDARALAPQICSHFLDPDAPLKIRVREEYLSDIESRLHAQEDIRGPLSE
LQQQVLPDIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPAKERLVVDRQVTALWEILSK
HEEESSSRLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLAFFPKTKKLSSSKKEKDGE
DRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHTEIPGEEGAEGDPP
RLSSSSLGEDSMDSPTVSMRLARSESLKAQGEGRRRGGSSGAETVPRSRSDVDMEDCGEE
SEGPGLRPLHHSTSSASSSSARSCENPTPPYTPRSSRRKSMEFPVALLPDAPALEEDVVD
SHNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVFFQKMRCVLSSDE
LACIFPNLPQVYELHASLCEAMKKRRESPIVQGIGDIMLARFEGVAGEEFQEQASHLCSQ
QSQALELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNILKH
TEAGSTDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKSLDLTSKR
MIHEGPLTWKVSKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRLLGGGGGGSGDTKA
SFSPVVQLDSLLVRSVATDNKALYVISTTEQQIYELVAGTSSEKNIWKDQLEKTISLAAG
SSPSTNNRSTPISSPSLGNASPVSTGSHVYQSDDSMAEQAVSMGTNSPNDEDNELTPTTP
TAQSGSFLHSEGRDYVKRQIGVAEAALEDVEMLKQLIFHNFEEVGWSHDSDGTPTNETAN
ERSPLNDRRRPASSETLLSASPSQLEAEDSEAPPSEVGSPSVHVVRKGNVFYLVMPTEQG
DGLLDESHTDEVIDPPTLTSTELPDLDQEVMSSNIQHHEEEGQVSSTLSAGDQSEPGNPR
REVGLGQSQKVLQSHVIKHVDEIFHTIEELMSKLHQLRDIETAHHQLLKTLREPPVNQES
DDLPRNQQTVVRTPSLDRDPGDAEPAKPEILSTGF
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcccccccacatcaacactggacaggctcagcagcctgacgataggagac
tcagagcgcaagacctccagcggccagcagagggagcctctggctgacttccccactgag
agcacaggtcaaggtctggttcagagatgtgtggttgtacagaaggaccagctagggttc
ggcttcactgtgtgtggcgagaggatcaagctggtgcagaatgttcgaccaggtggcgca
gcggtcaaggcaggggtccacgagggagacagaatcataaaggtcaatggctcgctggtg
tcgtccatgtctcatcaggaagtggtgaagctcatcaagtctgggacatatgttgctctg
actcttcaaggaccgcccccttcagcaactgccctccccctacatcccctcaccactgac
ctcttacccaatcagcggacgtcactgggaggagaagccccgcctccaccacctccacca
ctctcccccggactgaccagcacccccccccaaaggatcaccaaaccactacagaaccta
gacgtacagaaacacgccactcagatcctcaggaacatgctggaacagggagaggctgag
cttcaggacttgatggaggagctgttactgaacccctccccatccctggaggagcgaatc
gaaagtgccaagcggcgggcccaacaagtcagggttaaaatccagcaagatctggatgga
actcgattggacgctgtgaccagctatgtagtagcaggagaaggtcggttgtcgggggat
tcaagtgaaggagactttgaggcctgtgagagcccccactcctccccctccacctcctcc
ttcaggacccccctctaccggagacagggctccgacacacacaccttctccgactcggct
gggaaggcccagatcattggcccagaggaagaggaggaagaggacgacagctatccgctc
aatgacatggacggcccgtttcaggacatagaacttctcaagtcgcgaccggcccacatg
accgtgttcatgagatacctcttcagccagctactggatcccaacccgctgctgttctac
ctgtcggtggaggcctacctgggctccagccctaaagacgcccgtgccctcgccccacag
atctgctcccacttcctggaccctgatgctccgttgaaaatcagagtacgagaagaatac
ctgtccgatatagagagtcgtctccacgcccaggaggacatcaggggacctctttctgag
ctccaacagcaggtgctgcctgacattcaggaccaaatacaggattacaggagtaagcag
atgatgggtctgggttctctgtttggagagggagacctgcagcagctggatggagaccca
gccaaggagagactagtggtggacagacaggtcactgctctctgggaaatactctcgaag
cacgaagaggagagcagttctcgtctagcctctgcggtgctgctgtacctccgtcactca
ggcataaagctgagggactccagggtgttcccaggtctcagcactgagaaggagaagtgg
ctcgccttctttcccaagaccaagaagctgagcagttcaaagaaagagaaggatggagag
gacaggaagagaaaccccatcctgaagtatatcggcaagcccaggagcacctctcagtcc
acgttccatgtccctttgtctcccactgaagtgcgtccgggcagtgtgaggaacatcatc
cagcagtttgagaaccacacagagatccccggggaggagggggccgagggagaccctccg
agactgtcctccagcagcctgggagaggacagcatggacagccccacggtgtcgatgcgt
ctggctcgtagtgagtctctgaaggcgcagggggaggggcgtcggcggggcgggtcctca
ggggcggagacagtccctcggtcccgtagcgacgtggacatggaggactgtggagaggag
agtgaagggccgggcctgagacccttacaccacagcacctcctctgcctccagcagctca
gcacgatcttgcgagaaccccacccctccgtacacccctcggtcttccagaagaaagagt
atggagttcccggtggccttgctccctgacgccccagccctagaggaggacgtggtggac
agtcacaactggcaagagacggtggccccgcaggtcctggctactctctgtccccgagag
gtggacagacaggctgtcatctacgagttgctgacgacggaggcgtctcacctgcgtaca
ctcagggtgttggatcaggtgttcttccagaagatgaggtgtgttctgagctctgacgag
ctggcctgcatcttccccaacctgcctcaggtctacgagctccacgcgagtctgtgcgaa
gccatgaagaagagaagagaatctcccatcgttcagggcatcggcgacatcatgctggcc
aggtttgagggcgtggcgggggaggagtttcaggagcaggcgtcccacctgtgcagtcag
cagtctcaggccctggagctcatcaagaacaaacagcgcaaagacccccgcttcgcacac
atcatccaggagtgcgaggccagtcctcactgtaggaggctgcagctgaaggatctgctg
gtgtctgagacgcagaggctcaccaagtaccctctgctactggacaacatcctcaaacac
acagaggccggttccacagacctccctcctctccaacaggctcaagcctgttgccggggg
atactgcaggccgtcaacgaggttgtcagggagacggaacaccggcagcggctcaaccaa
taccagcgcaggttggaccccacgccacagttcaagagtctggacctgaccagtaagaga
atgatccatgagggtcctctcacctggaaagtcagtaaagacaaaaccttggagatccag
gcgctgctgttgtcagaccttctggtgttgctccagagaggtccagacgaccggctgctg
ctgcgctgcccgtcccgcttgctggggggaggtggtgggggtagcggggataccaaggcc
tccttcagccccgtagtccagctagactcactgctggtgcgctctgtggccacagacaac
aaggccctgtacgtcattagcacaacagagcaacagatatacgagctggtagcagggacg
tcctcagagaaaaacatctggaaggaccaacttgaaaagaccatctcattggctgctggc
tcctcaccttcgaccaataacagatccacacctatttcctccccgagtcttggtaatgct
tcccctgtctcaactggcagccatgtctaccaatcagacgactcgatggcggagcaggca
gtttcaatggggacaaactctcctaatgatgaggacaacgagctcacgcccaccacacca
acggcgcaatcagggtctttcctccacagtgaggggcgggactacgtcaagaggcaaatt
ggagtggctgaggctgctcttgaagacgtggagatgctaaagcagctgattttccacaac
tttgaggaagttgggtggagtcacgactcggacggaacgcccacaaacgagacagccaat
gagaggagcccgctcaatgacagacggagaccggcgtcctctgagactctcctcagtgcc
agtcccagccaattggaggctgaggattcagaagccccgccctcggaggtggggtccccc
agtgtacatgttgtgaggaaaggaaacgtgttctacctggtgatgcctacagagcaggga
gacggactgctggatgagagtcacacagatgaggtcattgatccccccaccctgacctcc
actgaacttcctgatctggaccaggaagtgatgtcatcaaacatacagcatcatgaggaa
gaagggcaggtctcttccaccctgtctgcgggcgaccaatcggagccagggaatccgagg
cgggaggtagggcttggccaatcacaaaaggtcctccagagccatgtgatcaaacatgtg
gatgagattttccacacaatcgaggagctgatgagcaagctgcaccagctgagggacatc
gagacagctcatcaccagctgctgaaaacactaagagagccgcctgtcaatcaggagtca
gatgacctccctcgcaaccagcaaaccgtcgtcaggacgccgtctctggaccgggaccca
ggggatgcagagccagctaagcctgagatcctctccactggattctaa
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