Salvelinus namaycush (lake trout): 120049812
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Entry
120049812 CDS
T07522
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04518
Integrin signaling
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120049812 (itga11a)
04518 Integrin signaling
120049812 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120049812 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120049812 (itga11a)
04810 Regulation of actin cytoskeleton
120049812 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120049812 (itga11a)
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120049812 (itga11a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
VWA_CoxE
Ku_N
Motif
Other DBs
NCBI-GeneID:
120049812
NCBI-ProteinID:
XP_038852186
UniProt:
A0A8U0R0Z0
LinkDB
All DBs
Position
1:81319750..81413355
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AA seq
1191 aa
AA seq
DB search
MEYCRAVFLWICCSLLPGLHDGFNIDTKNHRIIKGPKQAQFGYTVQQHVAGGQKWLLVGA
PYETNGHHQTGDVYKCPLGKRSNGSCSKLNLGRISLTNVAERKDKMRLGMTLTTNPKDNS
FVVCGPLWSYECGSSYYSTGICSRVNASFKFSKTIAPAFQRCETYMDIVIVLDGSNSIYP
WTEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFHLNDYKSVEEVVKRASNIHQRGG
EETNTALGINVALSEAFKRGARRGAKKVMIVITDGESHDSPDLQQAIEDSEKDGITRYAI
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFKVTDESALKDIVDALGDRIFSLEGTSK
NGTAFGLQMSQAGFSSHFVEDGILVGAPGAYDWNGAVLKETRQGKVVPPKSSYSQEFPEE
LKNHGAYLGYTVTSVVSARNGRLYVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGQQIG
SYYGSEISPVDIDGDGVTDNLLVAAPMFFSGGWEKGKVYIYRVTELNRFVLEGALEIQDR
GQNARFGSSLAPVPDLNGDGFNDVVVGAPLEDDHRGAIYVFFSQRNRILRKYKQRIAALD
MASGLRYFGRSIHGSMDMDEDGLVDLAVGSLGAAVLLWSRSVVRIHANIRFEPSKINIFV
KDCERGGKDVTCISAVVCLNVTARTAIPPTQEVAITYNTTIGERRFNPRAIMEDPDKLLF
QNLTLLSGEETCQHIYFHVMETTDYERPIVFTVAVALQHPDQGPALDDTWPTTVRTELPF
WNGCDEDDRCIPGLSLQSTTDLLSWRQFCGNAVHSRGAMCRRLSEGGTEGSERVMEGSRR
RMVVDVRLENRGENAYGARLNITYTPNLRFSSLIVKHNSDIKIECRSEDRQRHEKTCNVS
APFMRAKTQVSFRLEFEFSRSVFLDHVRVILEASSDGEEVTLEDNFNDIFHPLKYEADLL
FTRDSNPSGCEIKADLSLEIPGNIGPPFNFTFQIQNLGFFPVRDLQLNIEIPEMTKNGNQ
LLQISDFHIDKTDGTRCIPPQHVAQSRASPEDLSRVSRLNQSNTLPLPVQCTVNLNPYKE
VSVRIRGALRLDALHALRFKVLELVTSASVELPPSSPMFLHEERPVRHIILEIRKEGDYR
ISIWIIIGSTLGGLLLLSLLSLALWKLGFFQRQKRREEDEQETNGKVAEER
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggagtactgccgcgctgtgtttctctggatctgctgcagcctgttgccagggctccat
gatggtttcaacattgacaccaagaatcacaggatcatcaagggtcccaagcaggcccaa
tttggatacactgtgcagcagcacgttgccgggggacaaaagtggttattggtgggcgct
ccatatgaaaccaatggtcaccaccagacaggggatgtgtacaaatgcccattgggcaaa
cggtccaacggcagctgctccaaactcaacctaggaaggatatctctgaccaatgtcgcc
gagcgaaaagacaagatgaggctggggatgacgctgacaaccaaccccaaagacaatagc
tttgtggtctgtggacccctatggtcctacgaatgtggcagctcatactacagcactggg
atctgctctcgagtcaacgccagcttcaagttctccaaaaccatcgctccagccttccag
aggtgtgagacctacatggatatagtgatcgttctggatggttccaactccatctacccc
tggacggaggtgcaagcctttcttatcaacattctacagaagttctacattggaccaggc
cagatacaggttggagtggtgcagtatggggagaaggtggtgcatgagttccatctgaat
gactacaagtcggtggaggaggtggtgaagagagcgagcaacatccaccagagaggcgga
gaggaaaccaacacggcactcggcatcaacgtcgctctctcagaagcattcaagcgagga
gcccgacgaggcgccaagaaggtgatgatcgtgatcactgacggggagtcacatgacagc
cctgaccttcaacaggccatcgaggacagcgagaaggatggtatcacccgatatgccatc
gctgtgcttggctactacaaccggcgtggaatcaacccagaggcattcctgaatgaaatc
aagtatatcgctagtgaccccgatgacaagcacttcttcaaggtgactgatgagtctgcc
ttgaaggacattgtggacgcgcttggggataggatcttcagtttggaagggaccagtaag
aacgggacggcatttggcctccagatgtctcaggctggcttctcttcacacttcgtggag
gatgggatcctggtgggggcaccgggggcctacgactggaatggagccgtcctgaaggag
acccgacaggggaaggtggttccacccaagtcctcctactcacaggaattcccagaggag
ctgaagaaccatggcgcctacctaggttacacagtaacatcggtggtgtcggccaggaat
ggtcgactgtatgtggcaggggcaccgcggttcaaccatactggcaaggtcatcatcttc
accctgaagaacactggcaacctcaccatcctgcactccctcaaaggacaacagattggg
tcgtactatgggagtgagatctccccggtggatatagatggtgacggagtaacagacaac
ctactggtggcagcgcccatgttcttcagtggaggctgggagaagggcaaggtgtacatc
tacagagtgactgagctgaatcgtttcgttctggagggagcgttggagatccaggaccgt
ggtcagaacgctcggttcggctcctcgctggccccggtccctgacctgaacggggacggc
ttcaacgacgtggtggtgggggccccgctggaggacgaccatagaggagctatctacgtc
ttcttcagccaacgcaacaggattctgcggaaatacaaacagaggatagctgcgttagac
atggccagtggcctgcgctactttggccgtagtatccatggcagtatggacatggacgag
gatgggctggtggacttggccgtgggctccctgggggcagccgtgcttctatggtctcgc
agtgtcgtccgaattcacgccaacatcaggtttgaacccagcaagatcaacatctttgtg
aaggactgtgagaggggaggcaaggacgtgacctgcatatcagccgtagtgtgtctaaac
gtcaccgcccggacagccatacctcctacacaggaagtggctatcacttacaacaccacc
attggggagcgccgattcaaccccagagccataatggaggaccctgataaactgctgttt
caaaacctgaccctgctttctggagaggagacctgtcaacacatctacttccatgtcatg
gagaccacggactacgagaggcccatcgtgttcactgtggcggtggcactgcagcatccc
gaccagggccctgcgctggacgacacctggcccaccaccgtcaggactgagcttcccttc
tggaatggctgtgatgaggacgaccgctgtataccaggcctgtccttacagagtacaact
gacctgctgtcttggaggcagttctgtgggaatgcagtccactccaggggtgcgatgtgt
cgacgtctgtccgaaggagggacggaggggtcagagcgagtgatggagggatcgaggagg
aggatggtggtggacgttcgtctggagaacaggggagaaaacgcctacggagcccgcctc
aacatcacctacactcctaacctgcgattctctagtctcatagtcaagcacaactcagat
atcaagatagagtgtcgcagtgaggacagacagaggcatgagaagacctgcaacgtcagc
gctcccttcatgagagccaagactcaggtatctttccgcctggagtttgagttcagccga
tcagtgttcctggaccacgtacgagtcattctagaagccagcagtgacggagaggaggtt
accttagaagacaatttcaacgacatctttcacccgctgaaatacgaggctgacctccta
tttacaagggactccaacccctctggctgtgagatcaaagcagacctctccctggagata
ccgggaaatattggtcctccattcaacttcaccttccagattcagaatctgggcttcttt
cccgtgagggacctgcagttgaatatagaaattccagagatgaccaaaaacgggaaccag
ctgttgcagatatcggacttccatattgacaagacagatggtacccgctgcataccccct
caacatgtggcacagagcagggcgtccccagaagacctctctcgagtctcacgcctgaac
cagtccaatactctgcctctgccggtccaatgcactgtcaacctgaacccctacaaggaa
gtcagcgtcagaatcaggggggcattacggttggacgccttgcatgctctgaggttcaaa
gtcctggaactggtgacgagtgcatcagtagaacttccaccttcaagccccatgtttctt
catgaagaaaggcctgtcagacatataatcctggagattaggaaagaaggggattacaga
atctcaatctggattatcattgggagcacgctgggagggttgttgctgctgtccctgctc
agcctagctctatggaagcttggcttcttccagaggcagaagaggagagaagaggatgag
caggagaccaatggaaaggtggcagaggagcggtaa
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integrated database retrieval system
