Salvelinus namaycush (lake trout): 120049843
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Entry
120049843 CDS
T07522
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049843
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120049843
Retrieval pathways
120049843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120049843
NCBI-ProteinID:
XP_038852225
UniProt:
A0A8U0QZL7
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Position
Sna6:complement(29348726..29538455)
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AA seq
560 aa
AA seq
DB search
MSTDGNKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGIKPQTTPGGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQEKQRQDDAGA
SELEEREEEDTEEEEQGEEGEESTPEVSFASEPSPLSDGRLVKSLSEAPIGSPKDAAGER
ASLHRQQSLPHRPTIPMVARIADQNTSGTPAMTEREASRLDKFRQVLAGPNTDLDELRKL
SWSGIPRQVRPITWKLLSGYLPANTERRESTLQRKRQEYFGFIEQYYDSRNDEHHQDTYR
QIRIDIPRMSPECLLLQPMVTEIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPAS
GYVQGINDLVTPFFVVYVFEYIKEEVENFDVSSLQEETLRNIEADSFWCMSKLLDGIQDN
YTFAQPGIQIKVKDLEELVSRIDEMVHVHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIR
LWDTYQAEPEGFSHFHLYVCAAFLVRWRKAILDERDFQGLMILLQNLPTMHWGNEEVSVL
LAEAYRLKFAFADAPNHYKR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacggaaacaagaaacaattctggaaaagaaacacagctaaggtccctggc
agcatacaacacgtgtatggtgctcaacatcctcctttcgaccctcttctgcatgctaat
ctaatcaaagcgggcatcaagccccagacgacaccgggagggaagccaaagaaagccacc
accttccaggagtttgagagcatcaccagcgatgcctgggacgtgggggacgatgacgac
gagctgctcgccatggccgcacagaacctcaacatcgaggtcgtcatggaaaccgccaac
aaggttatcgagaaccacagcaagcagcaggagaagcagagacaggacgatgccggcgcg
tcagaactggaggagagagaggaagaggacacagaagaggaagagcagggggaggaaggg
gaggaatcgacccctgaggtgtcgtttgcctctgagcccagcccgctcagcgatggcaga
cttgtgaagtcactgagtgaggcccccatcggatcacctaaggatgcggccggagagaga
gcgtcgctccacagacagcagtccctgccccaccggcccaccatccccatggtggctcgt
atagctgaccagaacacctccgggaccccagccatgacggagagagaggcctctcgcctg
gacaagttcagacaggtcctggctggaccaaacactgaccttgatgaattacgaaagttg
agctggtctggaattccgcgccaggttcgtccaatcacgtggaagctcctttcgggttac
cttcctgccaacacagagaggagagagagcacgctacagaggaagagacaggaatacttt
ggtttcatagaacagtactacgactcacgcaatgacgagcaccaccaagacacatacaga
cagattcgtatagacatcccccggatgagtccggagtgtctattgctgcagcctatggtg
acagagattcacattgacataccgagaactaatccccttattcctctctttcaacaagct
tctgtccaagagatctttgagcgtatcctgttcatctgggcgatccgccacccggccagc
ggctacgtgcagggcatcaacgacctcgtcacgcctttcttcgtcgtctatgtctttgag
tacatcaaggaggaggtggagaactttgacgtgtccagcttgcaggaggagactttgcgg
aacatcgaggctgacagtttctggtgcatgagcaagctgttggacgggattcaggacaac
tacacatttgcccagccggggatccaaataaaagtgaaggatctggaggagttggtcagc
aggatcgatgaaatggtgcacgtccacatgcagcagtatgaagtggagtatctccagttt
gccttccgttggatgaacaacctgctgatgagagagctgccgttacgctgcactatacgc
ctctgggacacctaccaggctgaaccagagggattctctcacttccatctctacgtgtgt
gctgctttcctggtacgatggaggaaagctattctggatgagagagatttccagggtctg
atgatcctgctgcagaacctacccaccatgcactggggcaacgaggaggtcagcgtgctc
ctggccgaggcctacaggctgaagtttgccttcgctgacgcccccaaccactacaagaga
tga
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