Salvelinus namaycush (lake trout): 120049885
Help
Entry
120049885 CDS
T07522
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120049885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120049885
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120049885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
120049885
NCBI-ProteinID:
XP_038852297
UniProt:
A0A8U0QZ75
LinkDB
All DBs
Position
6:complement(32171542..32227274)
Genome browser
AA seq
521 aa
AA seq
DB search
MDDDFDRRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPG
DSVVMTNSHSVTETVSVSSSSMTSSGGGDDDEQALLERMAKREERRQKRLMEALEREKDQ
NPGNDGNHGSGENTVEERSVGRRGRYQDNEEEVEERNCRKEEEGEAAPEEEEAEQGEEEA
EEEEKPRRSYMREQESIDEKTRNEVNEKQNGGLHEETPQKHKKTERTLSRGSVRSPEAGA
EEQDDTAHLEAELKLEELKRRRDDAESEEFERMRQKQQEAEQELEELKKKREERRKIIEE
EERQKKQEEAEKKAREEEEKRRMKEEIERRRAEAAEKRQQMGVETVDAEAKPFKCFSPRG
SSLKIGERAEFLSKSAQKSTVKTTHSPVISKIDNRLEQYTSVAQNKDMRSPRSGAVDLPM
VTDGIRNIKSMWEKGSVFNSPGGGGGTYKEAAGMKIGVAGRINDWLNKTPESKTPGGRPA
DLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVANAGMGHE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgaccggcgccgagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgagcggatggccttccagggtagtaatgaggatgaggaggaggctgcgagg
gagcgtagacgcagggcgcgtcaggagaggatgagagggatgggaggcgaggagcccggt
gacagcgtggtgatgaccaacagccatagtgtgacagagactgtgtctgtgtcctcctcc
tctatgacctcctcgggtggaggagacgatgatgagcaggccttgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaagattgatggaagctctggagcgagagaaggatcag
aaccccggcaatgacggtaaccacggcagcggggagaatactgtggaggagaggtccgtc
ggccgcaggggccgttaccaggacaacgaagaagaggtggaagagcggaactgccgaaag
gaggaggagggggaggctgctccggaggaggaagaggctgagcagggagaagaagaagcg
gaggaagaggagaaaccgagacggtcctatatgagagaacaggaatccattgacgaaaaa
actcgaaatgaggtgaatgaaaagcagaatggaggtctgcacgaggagactcctcaaaaa
cacaaaaaaactgaaaggaccctgagccgcggcagcgtgcgttccccggaggcgggggct
gaggagcaggacgacacggcgcacctggaggcggagcttaagctggaggagctgaagcgc
cgccgtgacgatgcggagagcgaggagttcgagaggatgagacagaagcagcaggaggct
gagcaggagctggaggagctgaagaagaagagggaggagaggaggaagatcatagaagag
gaggagagacagaagaaacaggaggaggccgagaagaaggccagagaggaggaggagaag
aggaggatgaaggaggagatagagaggaggagggcggaggcggccgagaagagacagcag
atgggggtggagaccgtcgacgcagaggccaaacccttcaaatgcttcagtcccagagga
tcctccctcaagattggtgaaagggcagagtttctgagcaagtcggcacagaaaagcacg
gtgaagacgactcactctcctgtcatctctaagattgacaacagactggagcagtacacc
tctgttgcccagaacaaggatatgcggtccccacgctccggtgccgtggacctgcccatg
gtgacagatgggatacgcaacattaagagcatgtgggagaaaggcagcgtgttcaactcg
cccgggggcggcgggggcacgtacaaggaagcagctgggatgaagataggtgtggcgggc
cgcatcaacgactggctgaataaaacccccgagagcaaaacgccgggaggaaggcccgcg
gacctaaagccaggagatgtgaccaacaagagaagtctgtgggaaaacaagggctcctcc
ccagccaaggtgactggcagaggggagaataaatctgtcgccaacgcaggtatgggacac
gaatga
DBGET
integrated database retrieval system
