Salvelinus namaycush (lake trout): 120049932
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Entry
120049932 CDS
T07522
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120049932
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120049932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_19
TPR_16
TPR_BSK1_C
TPR_12
TPR_17
TPR_9
ARM_TT21_4th
ANAPC3
TPR_10
Motif
Other DBs
NCBI-GeneID:
120049932
NCBI-ProteinID:
XP_038852366
UniProt:
A0A8U0R1A9
LinkDB
All DBs
Position
6:complement(36115370..36128927)
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AA seq
667 aa
AA seq
DB search
MVGMSENKAIELQLQMRQNAEDLHNFMKDLDSWETDIKKKDEQLRSGSVGESQKSLPPVR
NKDYKKKREKKKASDNNAKTEPKQAPRIKSYDYQSWDKFDVDKVLESMDKEDSAAESNDS
ESEDSGVPATDQDKALAEKEKGNQLFKEGKYDDAIECYTRGMGADPYNPILPTNRAACFF
RLKKFAVAESDCNLSIALDSNYFKAFARRGAARFAQQNYESALEDYVMVLKLDPGNLEAQ
NEVMKCKEVIAKLGGKAESPEAAVVMPPVVDVKQQQLMEEQQRRQEAVVQKDRGNAYFKE
GKYEAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALDGTYSKAFAR
RGTARAALGLLKQAKEDFEEVLKLEPGNKQAFHEMKKIAIDMGTSGLLATEEHAQRRTVL
PVNKPPHLQSTKPLRRVDIEEVGGKILVQKEPSAVFTSTTAPCVRPQKTTSIADTVREGQ
GEASPPSTSPSAKILKIEEISNIPSHSPVKGPEGGAVRAQTQKHREATVSEPTEPPATPS
TEVVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDMLNQILRTL
QSFYIKNEEPPVILEILRNLAGVRRFDMAVMFMSNPEKKVLQELFDFLRQAGLEDASVGA
LQKKYGV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcatgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaatgca
gaggacctgcataacttcatgaaagatcttgacagctgggaaactgacataaagaagaag
gatgagcaactaagaagtgggagcgttggcgagtctcaaaaaagcctcccaccagtgcga
aacaaggactacaaaaagaagagggagaaaaagaaggcatcagacaacaatgcaaagact
gaaccaaaacaagcacccaggataaagtcttatgactatcagtcatgggacaaatttgat
gtggacaaggttttggagtccatggataaagaggacagtgctgctgagtccaatgactct
gaatctgaggattctggggttcctgctactgaccaagacaaagctcttgctgagaaggag
aagggtaatcagctgtttaaagaagggaagtatgatgatgccattgagtgttacaccaga
ggcatgggtgcagacccttataaccccattctgcctacaaaccgagctgcctgcttcttc
agactcaaaaagtttgctgttgccgagtctgactgcaacttgtccatcgctttggacagt
aactacttcaaagcatttgcacgaagaggcgcggctcgattcgcccagcaaaattatgaa
tctgccctagaagattatgtaatggtgctcaagctggatcctgggaacctggaagcacag
aatgaagtgatgaaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagccca
gaggctgcagtggtgatgccacctgtggtggacgtcaagcaacagcagctcatggaggaa
cagcagaggagacaggaggcggtggtgcagaaagacaggggaaacgcatacttcaaagag
gggaagtatgaggctgcagtagagtactacaccaagggcatggaagcggacagcaccaat
gtcctccttcctgccaaccgggccatggcttacttaaagctgcagagatataaagaggct
gaggaggactgcagtaaagccatagccctggatggcacctactcaaaggcctttgcccgc
agaggtacagctagggctgctctgggactgctaaaacaagctaaagaagattttgaggag
gtcctgaagctagaaccaggaaacaagcaggcatttcatgagatgaagaagattgcaatt
gacatgggcaccagtggtctgctggcaacagaggagcatgcacagcggagaacagtactg
ccagttaacaaaccacctcacctgcagtcaaccaaaccattgaggagagtggacattgag
gaggttggtggaaagatccttgtccagaaggagccctcggctgtgttcacttcaaccaca
gccccctgtgttaggccccagaagaccacctccatcgcagacactgtgagagagggtcag
ggtgaggcctcacctccctctacctcccccagcgctaagatcctgaagattgaagaaata
tcaaacatcccctcacattcccctgtcaaagggcccgaggggggtgctgtgagagcacag
acacagaagcacagggaggcaactgtcagtgaaccaacagaaccgcctgctacaccctca
actgaggtcgtacctcctgcccccaccaacagcttccagctagaggcagacctaaggaag
attggaaatggccctgaagttatctacaagtatttgaagcaaatccagcctcaggcttac
gcaaagatcttccagagctctcttgagccagacatgctcaatcagattctgaggacgtta
caaagcttctacatcaagaatgaagagccacctgtcatactggagatcctcaggaatctg
gccggtgtgaggcggttcgacatggctgtcatgttcatgtccaaccctgagaagaaagtt
ctacaagaattgtttgactttcttcgtcaagctggacttgaggacgcttcagtaggagcc
ctgcaaaagaagtatggagtgtga
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