Salvelinus namaycush (lake trout): 120049964
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Entry
120049964 CDS
T07522
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120049964
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120049964
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
DUF16
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
120049964
NCBI-ProteinID:
XP_038852430
UniProt:
A0A8U0QZI0
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Position
Sna6:complement(37996601..38029260)
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AA seq
913 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFLGSLRALHLLEDLRAALE
MMDQDEREGLRCQVPDTTADGLVEWLQQGQLTNGHGSAMIYQERLSRVESDKECLVLQMT
CGVLLSDDCPQVSVLSDQVEVQGEKIRDLDMCLEEHREKLDATEETLQQELLSRSTLETQ
KLELMTEVSSLKLKLTSVARDLRDSEGLYQEVNDLRFRVTDMENERLQCEKKLKSTKEEL
QTLQRQLEELRRLKDQAIHGVLTPDRTDGEKDVDVLRMKRAMESLMSANNDKDRRIEELQ
ESITRYKKVQDLVKDTLNEDDYDDIQDDRSPSIQVAMDTDQATLAVGEETGRSCDEIPSI
AVFSELEQESLIQEPDTDSPPEVPPHSAGSLGHINSNTEQTTIEEPSPPSTSPSNPTSNE
SFGTKKARSSFGRGFFKMRGGKRTSSAPNLDRSRSASAPTLAETERKGTDHLDLAGAPPH
KPQGGDSSQTLPSSPEAKKKSRGFMKFLGRLKRSHSTSLDLEETEFRRGGVRATAGPRLG
WSRDLQHSADDVDAPFAQWSKEQVCVWLQEQGLGLHVAQAQQWIRSGFTLLQASQHDLEK
ELGIKQPLHRKKLQLALQALGSEEDVSKAKLDHNWVTRWLDDIGLPQYKSQFDEGRVDGR
MLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNFYEPNCLRRRPSDENNITPGEISQWT
NHRVMEWLRSVDLAEYAPNLRGSGVHGGVMVLEPRFNVESLALLLNIPPNKTLLRRHLAT
HFHLLIGSAAQRSKQECLENPDYTLLTATAKVKPRRLSFGGFGTLRKKRQEDSEEYVCPM
DVEMPKNSSFQGGLRIYEDDLDQMEDSEGAVRQIGAFSEEIDNLTSMLKEDEFFSEVSSR
SPEASVTDDDSNL
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgccagtgagatgttggcagccgccttggagcaaatggatgggatcata
gcaggctccaaggccatggactactccaatgggctgtttgactgccagtcgcccacctct
cccttcctgggaagcctgcgggcgctgcacctgctggaggacctgcgggcggcgctggag
atgatggaccaggatgagagggagggcctccgctgccaggtccctgacaccaccgccgac
ggcctagtggagtggctgcagcagggacaactgaccaacggacatggttccgccatgatc
taccaggaacgactgtcacgggtggagagcgataaggagtgtctcgtcctccagatgaca
tgtggcgtattattgagtgatgactgtccccaggtgagtgttctctcagaccaggtggag
gtgcagggggagaagatcagggatctggacatgtgtctggaggagcacagagagaaactc
gacgccactgaagaaacgctgcagcaggagctgttgagcaggtcgaccctggagacccag
aagctggagctgatgaccgaggtgtccagtctgaaactgaagctgaccagtgtggcgaga
gatctcagggatagtgaggggttgtaccaggaagtcaatgacctgcggttcagggtgacc
gatatggagaatgaaagactgcagtgtgagaagaaacttaaatccaccaaagaggaactg
cagactcttcagaggcagctggaggagctgaggaggctaaaagaccaggctatacacgga
gtcctgaccccagacagaacagatggagagaaagatgtggatgtgctgaggatgaagagg
gccatggagtccctgatgtcagctaacaatgacaaggaccggaggattgaggagcttcag
gagtcgatcacacggtacaaaaaggtccaggacttggtgaaagacacactgaatgaagac
gattacgatgacatccaggatgacagatccccctccattcaggtcgccatggatacagac
caggccaccctggcagttggggaggagacaggacggagctgtgacgagattccatctatt
gcagtgttttcagagctggagcaggagagcctgatacaggaaccagacacagacagtcca
ccagaagtcccaccacattcagcaggtagcctgggccacataaacagcaacacagagcag
acaacaattgaggagcccagccccccatccacctccccatcaaaccccaccagtaatgaa
agctttgggaccaagaaggcccgctcctcctttggacgtggtttcttcaagatgcgtgga
ggcaagaggacgtctagtgccccaaatctggatcgcagccggagtgcgagtgcgcctacg
ttggctgagaccgagcgtaagggcacagaccacttggacttggctggtgccccgccacac
aaacctcagggaggcgacagtagccagaccctaccttcctcaccagaggccaagaagaag
tccagaggctttatgaagttcttaggcaggctgaagagaagtcactccacctcgctagac
ctggaggagaccgagttcaggaggggaggagtcagagccacggccggcccccgactgggc
tggtcacgtgaccttcagcacagcgccgatgatgtggatgctccctttgcgcagtggagt
aaggagcaggtgtgtgtgtggctgcaggagcagggcctgggactccatgtagctcaagcc
cagcagtggatccgctcaggattcactctgctgcaggcctcccagcacgacctggagaag
gagttggggatcaaacagcccctccacaggaagaagctgcagttagctctccaggcactg
ggatcagaggaggatgtcagcaaggccaaattggaccacaactgggtgaccagatggctt
gatgacattggtctgccgcagtataagagccagtttgatgaggggagggtcgatgggaga
atgctacactacatgactgtggatgacctgctgtctctaaaggtgggcagtgttctccac
cacctcagcatcaagagagccatccaggtcctccggctcaacttctacgagcccaactgc
ctccgccgacggccctctgacgagaacaacatcacgccaggggagatctcccagtggacc
aatcacagagtgatggagtggctgagatcagtggacctggctgagtacgctcctaacctg
aggggcagcggtgtgcacgggggggtcatggtgctggagcctcgcttcaacgtggagtcc
ctagccctcctgctcaacatccctcccaacaagaccctgctgcgccgccacctggccacc
cacttccacctgctcatcggctccgctgcccagcgcagcaaacaggagtgtctggagaac
cctgactacaccctgctcactgccaccgccaaggtcaagcccagaaggctgtcgttcggt
ggcttcgggaccctgcgtaagaagcgccaggaggacagcgaggagtacgtgtgccccatg
gatgtggagatgcccaagaacagcagcttccaggggggcctgaggatctacgaggacgac
ctggaccagatggaggactcggaaggggctgtgaggcagataggagcattttcggaggaa
atcgacaacctgacgagcatgctgaaggaggatgagttcttcagcgaggtctcctctcgc
tcccccgaggccagcgtcaccgatgacgactccaacttgtga
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