Salvelinus namaycush (lake trout): 120050052
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Entry
120050052 CDS
T07522
Name
(RefSeq) host cell factor 2-like isoform X1
KO
K27390
host cell factor 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120050052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120050052
03029 Mitochondrial biogenesis [BR:
snh03029
]
120050052
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
120050052
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120050052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
fn3
NANM
Beta-prop_TYW4
Motif
Other DBs
NCBI-GeneID:
120050052
NCBI-ProteinID:
XP_038852601
UniProt:
A0A8U0UI48
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All DBs
Position
6:complement(42963180..42969559)
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AA seq
774 aa
AA seq
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MDPLWKKVNSFTGPIPRSRHGHRAAAIRELIIVFGGGNEGIAEELHVYNTVSKQWFLPAV
RGDIPPGCAAHGFACEGTRILIFGGMVEFGKYNNSLYELQASRWLWKKLKPRPPKNGMPP
PCPRLGHSFTLIGNKCYLFGGLANDSEDPNGNVPRYLDDFYELELQSLSGVKGWNIPDTK
GVGPWARESHTSVAYTGSGSPKLYIFGGMRGSRLDDLWQLDLESMTWSTPDTKGPPPLPR
SLHSANVIENKMYVFGGWVPVPETDKPNALGAEWICTNSLSVLNLDTMTWQSLGPDQQQG
QTVSQGDQEEPQPSSGGPRARAGHCAAPIGSRLYIWSGRDGYRKSWNYQVCCQDLWYLET
ERPSTPAAVLLVKSTVSMLHVAWRPLPAAECYILQLQPVSPFNTPANPTARPSTGAQERN
PQDQDVQSAQVPDDPTSQEAQNTSQQEVAAGQKVPPMEVSVAVRDPHPEGESDASGKTQS
EPLGHEADPTKTSQPSDTVASSEHQPGQEPDTTSSDLNTVKCKVSGEKSDESEWFDAGVF
KTLFSEVTHYYLSPGNDFIPTIYSRPTNTKDIKLQGPQDYEWREKQELCPGVAYRFRVAG
INSCGQGDFSPASEFKTCQPGFPGAPSSVKITKANDSVHITWDSPTSPSGKILEYSMYLA
VRKSRSSSSSSEHPGQLAFIRIYRGTKTSCTVSPAHLANAYIDSSAPNRPAVVFRIAAKN
EQGYGPATQIRWLQDASKFKTSSTQPDGSPTEAEQEAADRLKMDCQTLADTQER
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacccgttatggaaaaaagtaaactcatttactggacctattccccggtcaagacac
ggacaccgagcagcggctattcgggaacttattatcgtgtttggaggtggaaacgagggg
atagcggaggagctccatgtttacaacaccgtttctaagcagtggtttctcccagcggtg
agaggggacatccctccaggctgtgctgcccatggttttgcctgtgagggaacccgcatc
ctgatctttggaggcatggtggagtttggcaaatacaacaacagcctgtacgagctacag
gcgagccgctggctgtggaagaagctgaaacccaggccacccaagaacggcatgccgccc
ccctgtccccgcctcggacacagcttcaccctcattgggaacaagtgctacctgttcggg
ggactggccaatgacagtgaggaccccaatggcaatgtcccaaggtacctggatgacttt
tatgagctggagctgcagtcactgtcaggggtgaagggttggaacattccagatactaag
ggcgtgggtccgtgggctcgagagtcccacacgtcggtagcatacactggatcaggctcc
cccaaactctacatcttcggaggaatgagaggcagtcgccttgacgacctctggcagctt
gacctcgaatctatgacgtggtctacacctgacactaaaggaccccctcctctacccaga
agccttcactctgccaacgttatagaaaacaagatgtatgtttttggggggtgggtcccc
gttccagagacagacaaacctaacgccctgggagctgaatggatctgtaccaactcctta
tccgtgctcaacttagacaccatgacatggcagagcctaggcccagatcagcaacagggg
cagacagtgagccagggtgaccaggaagagccccagcccagcagcgggggaccccgagcc
agggcaggccactgtgctgcccctatcggctcccgcctctacatctggagcggccgtgac
ggctaccggaagagctggaactaccaggtgtgctgccaggacctgtggtatctggagaca
gagcggccctccaccccagcagcagtactactggtcaagtccacggtcagcatgctccat
gtggcctggcgccccctacctgcagcagagtgttacatcctccagctgcagcccgtctcc
ccctttaacaccccagccaaccccacagcccgacccagcacaggtgcacaggagaggaac
ccccaggaccaagatgtccagtcagctcaggtcccagatgaccccacctcacaggaagcc
cagaatacatcccaacaggaggtggctgcagggcagaaagtgcctcccatggaagtgtca
gtggctgttagagacccccatccagagggggagagtgatgctagtggaaaaacacaatcc
gagcccttgggacatgaggctgaccccacaaaaacctcccagccctcggacacagtggcg
agcagtgaacaccagccaggacaagaacctgacaccacttcctcagatctcaacactgtc
aaatgcaaggtatctggtgagaaatcagatgagtctgagtggtttgatgctggagtgttc
aaaaccctgttttctgaggttacccactactacctgtcacctgggaatgactttattccc
accatctacagcagacccactaacactaaagatattaagttgcaggggcctcaggactat
gagtggagggagaagcaggagctgtgtccaggtgtagcctacaggttcagagtagcaggc
atcaacagctgtggtcagggagacttcagccctgccagcgagttcaaaacctgccagccc
ggcttccctggagcaccctcttctgtcaagatcaccaaggctaatgactcggttcacatc
acatgggactcccccacctccccgtcaggtaagatcctggagtactccatgtacctagcg
gtgaggaagagccggtccagcagcagcagctctgagcaccctggccagctggccttcatc
aggatctaccgcggcaccaagacctcttgcactgtcagccccgcccacctggccaacgcc
tacattgacagctccgcccccaaccggccagctgtcgtcttccgcatcgccgccaagaac
gagcagggctacgggcccgccacacagatccgctggctacaggatgccagtaaattcaaa
acctcttcaacacaaccagacggcagccccacggaggcagaacaggaggcagcagacagg
ttgaagatggactgccagacgctcgccgatacccaggaaagatga
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