Salvelinus namaycush (lake trout): 120050065
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Entry
120050065 CDS
T07522
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120050065 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120050065 (rbm17)
Spliceosome [BR:
snh03041
]
Complex A
U2 snRNP components
U2 related factors
120050065 (rbm17)
Complex B
120050065 (rbm17)
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GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
120050065
NCBI-ProteinID:
XP_038852617
UniProt:
A0A8U0R003
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Position
Sna6:43266689..43275574
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AA seq
430 aa
AA seq
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MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTAPSGFSSGDALIPLADEYDPMFPNDYEKVVKRHREE
RQRQREQERLKEIEDREKKRKDRHEGSSAPSGFSRFPAAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYDDEMRPSRGSKAAIPPPMYEDSDRPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDNTEKTPGSSSQT
AAAEPLGWGSASIVDPSKKSEANPLTEILKCPTKVVLLRNMVGRGEVDEDLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRVLDLGEQM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttacgacgacatgggcgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcagtcacagctgaaagtaaagaaggcagctctgact
caggctaagagtcagcggatgaagcagggtactgtcctggctccagtcattgacttaaag
agaggaggttccgctgatgacagacagataatagacacacccccacacattgcagcagga
ctcaaggacacagcacccagcgggttctcctcgggggatgcgctaatccccctggctgat
gagtatgaccccatgttccccaacgattacgagaaggtggtgaagagacaccgcgaggag
aggcagaggcagagagagcaggaacgactgaaggagatagaggacagagagaagaagagg
aaggaccgacacgagggcagcagcgctccgagcggattctcccgcttccccgcggcagaa
ggagagtcagatgaggaggaggaggactatgagaaggagaagaggaaaaggagtatgggt
ggagcagccatcgccccaccctcatcgctcgtggatagtagagacagctcgtcatactcc
tatgacgatgagatgcgtccctcccgtggttctaaagcagccatccctccccccatgtac
gaggactccgaccgcccccgctcgccacctggcggtcccaccaactcattcctggccaac
atgggagggaccgtggcccataagatcatgcagaagtatggcttccgggagggccagggg
ctgggcaaacacgagcagggtctcagcacggccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacaacactgagaagacaccaggatccagtagccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagtggacccatccaagaagtca
gaggccaaccccctcacagagatcctcaaatgccccaccaaagtcgtgctgctacggaac
atggtgggcagaggcgaggtggatgaagatttggaaggggagaccaaagaagagtgtgag
aaatatggcaaggtcatcaagtgtgtcatctttgagattgcccaggtgacagatgatgaa
gcagtgaggatatttctggagtttgagagagtcgagtctgccatcaaagctgtggtggat
ctgaacgggaggttctttggtggtcgggtggtaaaagcctgcttctataaccaggataag
ttcagagtgttggacctgggagagcagatgtga
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