Salvelinus namaycush (lake trout): 120050110
Help
Entry
120050110 CDS
T07522
Name
(RefSeq) neuron navigator 3-like isoform X1
KO
K23919
neuron navigator 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120050110
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120050110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ubiquitin_6
CH
AAA
NPHP3_N
AAA_22
AAA_25
AAA_14
nSTAND3
AAA_28
AAA_16
CAMSAP_CH
AAA_5
AAA_18
ABC_tran
RNA_helicase
AAA_24
PhoH
Mg_chelatase
BrxL_ATPase
NACHT
AAA_7
KTI12
DUF4407
Motif
Other DBs
NCBI-GeneID:
120050110
NCBI-ProteinID:
XP_038852681
UniProt:
A0A8U0R1W6
LinkDB
All DBs
Position
Sna6:complement(47465704..47691956)
Genome browser
AA seq
2398 aa
AA seq
DB search
MPVVGVASKLRQSSVGSKPVHSALPIPNPGRTAATRGYMARTPELRGSESPLLSSCQLSL
KSEYQERRTQQKQQGRSKETEESKICKIYTDWANHYLTKSGCPRLIKDLTIDIADGVLLA
EIIQIIANEKVEDINVSPRSQSHMTENLDACLSFLDARGVNVQGLSSEEIRNGNLKTILG
LFFILSRYKQQQQQQQQYYQSLVELTHQTTGAAPASPLKTQPEMQSSLTARYGSPPGHSG
IGATPQKKNTRLPGPTRVSAAGSGAPKGQGSSNLNRRSQSFNSIDKSKPLQYASGNDRES
AKSIPLPGSMNGGAPVPTSLSGQQLASAIPSPTAGKSWRSKSMNMKHSATSSMLSVSTSP
SHSPTPPPASDRLRPPMTEAPKSGSVAGGGASQRSMLDKFRMINPRSASRTSPSVAEMAL
QEEDDMSEYGEEGLSITEPTSSMCTSSSNSTKPLAKTASPPSLAAANKGCVKDSSPSSGG
SNKSLPQPKDKEDKSRSKGGKASTPPKEEQREPMVDPSKKTSKIASLIPKGGKPAAGKKD
SAIPPASSGIPKPGLKAPSATGKPAGGQAQTQATQGGSGGGREGDKAKVVKGGQGGYYMQ
QRSLGGLEGRRSNMVSSTSTSALSQPPGAMGGNGAVQLPQQQQHNHPNTATVAPFMYRTY
SENDCTTVAPTDHCLSPTKGDLVYSKTAKQCLEEISGEDPETRRMRTVKNIADLRQNLEE
TMSSLRGTQISHSTLETTFDSTVTTEVNGRSITSRSAPMTSWRLGQSAPSPRLQAGDAPS
MPSTYTTVPPPRTGASTGGATGRYGHSDSSRFVYSAPLRRAATAGARGAEQGEKGGGPEG
MLEMDVAGYMSDGDILGKNVRTDDITSGYLTDGGLHLYSRNVGRAPDLNTSLEVTQRVVK
EVHGDADSWDDSSSVSSGLSDTVDNISTDDLNTPTYPAVTSSPRKNKAAQADTHQHVEQE
VSSSWAGAEDLKKVDEELDVSMEPSSKWKSSSSSASSPAGQCGEDPGQKTGLPMSQTGSW
RRGMTAQVGITPPRTKGTSATLKTPGKTDDAKASEKCKAPSKTAGIQRSPSDAGKSSGDE
GKKPPSGIARPPTTGSFGYKKMASPPSGALITSSGATLASGSATLGKVPKSSAIGKGTGI
SGGRKTSLDGSQPQDDGVLMGCGGSKVPLQYRSLPRPAKSSSGGVVGRSGHRSSSSSIDS
NVSCKSAGGTGTKRRDAGKVGSGRSSPIPITINQTDKEKVAVSDQDPAGLSTSPKSSPTS
TGQSGLRQPGSKYPDIASPTFRRLFGTKASSKASTPGTPDSGKCPSALGSPHGTLARQAS
LDSPSSGTGSLGSAGGQSGASSPLYGKVPDLGTDSPASSPASGLSLPSNARPWPTNLSSS
SACSGSKDTLSCQSMTSLHTSSESIDLLLGHHHGPKVTRTASVKSTLSEGMPLDRNTLPK
KGLRYPPSSRQTSHEEGKEWLRSHSTGGLQDTGSQSPLSPPGVACTSTGKYHYSNLLSPT
NLSPYNLPGPSGMSRSNSIPAQDSFDLYGEAHLGGSATSLEDRPRGMSRSGSFRDSTDEV
HGSSLSLVSSTSSLYSAVLSFLAKTEEKAHSEGQTGQNTTQIRKLRRELDASQEKVATLT
SQLSANAHLVAAFEKSLGNMTCRLTSLTMTAEQKESELAELRETIEALKAQNTDAQTAIQ
VALNGPDHLHKDLRIRRQHSSESMSSINSAASHSSLGSAKDLEDKKKKKKSWVADSIPAQ
LRSSFKQAFSKKKGNKPQSPQDDIEEMTDSSLPSSPKLQHANRQDSFPTLLSSASTTELC
ECTEAEAEIILQLKNELREKELKLTDIRLEALSSAHHLDQIREAMNRMQNEIELLKAEND
RLKTGGTTPAATPAKMGRPPSETSSTSSSSSRQSLGLSLNNLNITDTIMSDILLDDGYEG
NLRKEGRSVRIVVTINSGSNKTKGMQSQEYLIGSIGVSGKTKWDVLDGVIRRLFKEYVLR
VDPLTSLGLNSDSIVSYRMGDVVRAHASELPEMLPCGYLVGDNNVISVNLKGVKENSIDS
LVFDTLIPKPIIQRYLNLLMEHRRIILSGPSGTGKSFLASKLAEFIVTKSGRKVTESNLA
SFNVDQKSSKDLRQYLSSLAEQCNSEDSETELPTVVILDNLHHIGSLSDIFNGFLNYKYH
KCPYVIGTMNQGVSSSPNLELHHNFRWVLCANHTEPVKGFLGRFLRRKLIETEINRNMRS
NDLIKVIDWIPKTWQHLNGFLEAHSSSDVTIGPRLFLSCPMDADGSRVWFTDLWNYSLVP
YLLEAVREGLQLYGKRAAWEDPSKWVKDTYPWRSVSLQHDSQALLQLRPEDVGYDGYSSS
KEGASSKQVSQSDTEGDPLMNMLMRLQEAANYSSAQSCDSDSASHHDDQLDSSLESAL
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggtaggggtagcctccaagctcagacaatcctcagtgggctccaagccggtc
cacagcgctctccccatccccaacccgggaagaaccgctgccacacgagggtacatggcc
aggaccccagagctgagggggtcagaatcccccctgctctcctcctgtcagctgtcactc
aagtcagagtaccaggagaggaggacgcagcagaagcagcaaggacggagcaaggagaca
gaggagagtaagatctgcaagatttatacagactgggccaaccactacctgaccaagtct
ggctgccctcgactcatcaaggacctgaccatagacattgctgacggagttctgctggca
gaaatcatccagatcatagctaatgagaaagtggaggacatcaatgtcagccccaggagt
caatcacacatgaccgagaatttggacgcctgcctcagtttcctggacgccagaggagtg
aatgtacaagggctctcctcagaagagatccggaatgggaacctaaagaccatcctggga
ctgttcttcatcctgtctcgctacaagcagcagcagcaacagcagcagcagtactaccag
tccctggtagagcttacacaccagaccaccggggcggcgccggccagccccctcaaaacg
caaccagagatgcagtccagtctcactgcgcggtatggtagtcccccgggtcacagtgga
ataggagcaacaccacagaagaaaaacacaaggttgccagggccgaccagggtgtccgct
gcaggcagcggggcccccaagggccaaggatcctccaacctcaacaggaggagtcagagc
tttaacagcatcgataagagcaagcctctccagtatgctagtggcaatgacagagaatcg
gcgaagagcatccctctgcctggcagcatgaacggaggtgcccccgtgcccaccagcctc
agcgggcagcagctggcctctgccatcccctcccccaccgccggcaagtcctggcgcagc
aagtccatgaacatgaagcacagtgccacctcctccatgctctcggtctccacctcgccc
tctcactcgcccaccccaccccccgcctccgaccgcctacggccccccatgaccgaggcg
cccaagtcgggctctgtcgctggcggtggcgcctcccagagatccatgctggacaagttc
cggatgatcaaccctcgctcggcctcgcggacttcgccgtcggtggccgagatggccttg
caggaggaggatgacatgtcggagtacggcgaggaagggctaagcataacggagccaacg
tcgtcaatgtgtactagcagcagcaacagcaccaagccgctggccaagactgcctcgccc
ccctccctggcagcagccaacaagggctgtgtgaaggactcgtcgccctccagcggcggc
agcaataagtccctgccccagcccaaagacaaggaggataagagcaggagcaaaggaggt
aaggccagcacccctcccaaagaggaacaacgggaacccatggtggatccatccaagaag
acctctaagatcgccagcctcatccccaagggaggcaagcctgcagcgggcaagaaggac
agcgccatcccccctgcctccagtggaatccccaagcctgggctcaaggccccctcggct
acggggaagccggccggcggtcaagcccagacccaggccacccagggtggtagtggaggg
ggcagggaaggggacaaggccaaggtggttaaagggggccaggggggctactacatgcag
cagcgctccctggggggcctggagggccggcgaagcaacatggtgtcttccaccagcacc
tctgccctgtcccagcccccaggggccatgggggggaacggagcggtgcagctcccccag
cagcagcagcacaaccaccccaacacagccaccgtcgcccccttcatgtataggacgtac
tccgagaacgactgtaccacggtggcccccacagaccactgcctcagccccaccaaggga
gacctggtctacagcaagactgccaagcagtgcctggaagaaatctcaggggaagacccc
gagacgagacgcatgcggacagtgaagaacattgctgacctacggcagaacctggaggag
accatgtccagtctgcgggggacgcagatcagtcacagcaccttggagacgaccttcgac
agcacagtgaccacagaggtcaacgggcggagcatcaccagtcgctccgcccccatgacc
tcctggcgcctcggccaatcagccccaagcccccgcctacaagctggcgacgccccttct
atgcccagtacctacaccacagtcccaccacctcggacgggtgccagcacaggtggcgcc
actgggcggtacggtcactcggactcctcccggtttgtgtacagcgcccccctgaggcga
gcggcgacggcaggggcgagaggggccgagcagggggagaagggaggagggccggagggg
atgctggagatggacgtggcagggtacatgagcgacggagacatcctggggaagaacgtc
aggacagatgacatcaccagtgggtaccttacagacggtggtcttcacctatactcgcgg
aacgtcggtcgcgcccctgacctgaacacgtcgctagaggtcacccagagggtggtcaag
gaggtgcacggggacgcagacagttgggatgacagcagttcggtcagcagcggtctcagt
gacactgtagataacatcagcacagacgatctgaacacgcccacctaccccgccgtcaca
tcgtcaccacgcaagaacaaggcagcccaggcggacacacaccagcatgtggagcaggag
gtcagcagcagctgggccggagctgaagatctgaagaaggtggacgaggagctggatgtc
agcatggagcccagctcaaagtggaaatcttcctcctcctctgcctcctcgccagcgggg
cagtgcggcgaggatcccgggcagaagacgggcctacccatgtcccagactggctcctgg
agaaggggtatgactgcccaggtgggcatcacgcccccccggaccaaaggcaccagcgcc
accctcaaaacccctggtaaaactgatgacgctaaggcctcagagaaatgcaaggccccc
tccaagaccgctggcatccagcgctcgccctccgacgctggcaagagcagtggcgacgag
ggcaagaaacccccctcgggcatcgcccgcccccccaccactgggtcgttcgggtataaa
aagatggccagccccccctctggtgccctcatcacgtccagcggtgccaccctggccagt
ggctccgccaccctggggaaggtgcccaagtcttcggctatcggcaaggggacagggatc
agcggaggccgtaagaccagcctggatggctcccagccccaggacgatggggtgctgatg
ggctgcggaggctccaaggtgcccctccagtaccgctctctgccccggccggccaagtcc
tccagcgggggggtggtggggcgcagcgggcaccgctccagttccagcagcatcgattcc
aatgtcagctgcaagtcggccggaggaacggggaccaagcgaagggacgctgggaaggtg
ggctcggggcgctccagccccatccccatcaccatcaaccagacggacaaggagaaagtg
gccgtgtcggaccaggacccagcaggtttatccacctcccccaagtccagccccacctcc
acgggccagtctggcctcaggcaaccagggtccaagtacccggacatcgcctcacctacc
ttccgcaggttgtttggcaccaaagccagcagcaaggccagtaccccaggcacacccgac
tcaggcaagtgcccctctgcgttgggcagccctcatggcacattggcgcgccaggccagc
ctggactctccctcttcgggcacggggagcctgggcagcgcgggcgggcagagcggggct
agcagcccactttatggcaaggtccctgacctgggcactgattcgcctgcctccagcccg
gcgtcaggcctctcgctgccctccaacgcccgcccctggcccaccaacctcagcagctcc
tcggcatgctctggcagtaaggacacactgagctgccagagcatgaccagtctgcacacc
agctccgagtccattgacctgctgctggggcaccaccacggccccaaagtcacccgcacg
gccagcgtcaagtccacgctttctgagggcatgcctcttgacagaaacacactccccaaa
aagggactgaggtaccctccctcgtccagacagacgtcccatgaggaggggaaggagtgg
ctgcgttctcactccactggagggttacaggacacggggagtcagtctcctctctccccc
cctggagttgcatgcacaagcaccggaaaataccactactccaacctgctgagccccacc
aacctgtcaccctacaacctgccaggacccagcggtatgagtcgctccaacagcatccct
gcccaggactcttttgacctgtatggagaagcccacctggggggcagcgccacctctctg
gaggacagaccccggggcatgagccgctctggctccttcagggacagcaccgatgaagtc
catggatcctcactgtcgctggtctccagcacctcgtccctgtactctgcggttctttcc
tttctggccaagacagaggaaaaggcacattctgagggtcaaacaggccaaaataccacg
caaatcaggaagctgcgacgagagttggacgcctcccaggaaaaggtcgcgaccctcaca
tctcagctgtctgccaatgctcacctggtggcagcctttgagaagagcctggggaacatg
acctgtcgcctaacgagcctcaccatgacagctgagcaaaaggagtcggagctggctgag
ctgagagagaccatcgaggcgctgaaagcccagaacacagacgcccagacagccatccaa
gtggccctcaacggccccgaccacctacacaaagacctgcggattaggcggcaacactcg
tcggagagcatgtccagcatcaacagtgcagccagtcactcatccctgggcagcgccaaa
gacctagaggacaagaagaagaagaagaagagctgggtggctgattccatcccagcacag
ttgcggagctcgttcaagcaggcgttcagtaagaagaagggcaacaagcctcagtctccc
caagatgacatcgaagagatgacggactcatcgctgccttcctcgcccaagctacagcat
gctaacagacaggacagcttcccaacactactctcctcagcctctaccacagagctgtgt
gagtgcacggaggcggaggcggagatcatcctgcagctgaagaacgagctgagggagaag
gaactgaagctgacagacatccgcctggaggctcttagctccgcccaccacctggaccag
atccgagaggccatgaaccgtatgcagaatgagatcgagctgctgaaagcagaaaatgac
cgtctcaagacgggaggcaccacgccagccgccacaccagccaagatgggccggccgccc
tctgagacctccagcacatcctcgtcctcctcgcgccaatctctgggcctgtccctcaac
aacctcaatatcacagacaccatcatgtcagatattctcctggacgatggttatgagggc
aatctacgcaaagaggggcgcagtgtccgcattgtggtcacaatcaacagtggctccaat
aagaccaagggtatgcaaagccaggagtacctcattggttccatcggcgtgagcggaaag
accaagtgggatgtgctagatggagtaatcagacgattattcaaggagtacgtgttgcgg
gtggacccactgaccagtctggggctgaactcagacagtatagtcagctataggatgggg
gatgtggtgcgggcccacgcctctgaactgcctgaaatgctgccctgtggctacctggtg
ggggacaacaacgtcatcagcgtcaacctcaaaggtgtgaaggagaacagcatagacagc
ctggtatttgacaccctcatccccaagcccatcatccagagatacctcaacctgctcatg
gagcatcgccgcatcatcctctctggccccagcggcaccgggaagtccttcctggccagc
aagctggcagagttcattgtcaccaagtctggtcgaaaggtcacggagagcaacttggct
agcttcaacgtggaccagaaatccagcaaggacctgcgtcagtacctatccagcctggca
gagcagtgcaactctgaagacagcgagacggagctgcccaccgtggtcatactggacaac
ctccaccacatcggctcactcagcgacatcttcaacggattcctcaactacaagtaccac
aaatgcccgtatgtaattggaaccatgaaccagggagtgtcttcctctcccaaccttgag
cttcaccacaatttcaggtgggtgctgtgtgccaaccacacggagccggtcaagggtttc
ctgggacgatttctgcgcaggaagctgatcgagacagagatcaacaggaacatgcgcagc
aatgacctcatcaaggtcatcgactggattcccaagacgtggcagcacctcaacggcttc
ctggaggctcacagctcctcagacgtcaccatcggtcccaggctcttcctgtcctgcccc
atggatgcagatggctcgcgggtgtggttcactgacctatggaactactccctggtgcct
tacctgctggaagccgttagagaagggctccagctgtacggcaagagggcggcgtgggag
gacccgtctaagtgggtgaaggacacctacccctggagatctgtctccttgcagcatgac
agccaggccctgctccagttacggccagaggacgtgggctatgacggctacagctcctcc
aaagagggcgcctcctccaaacaagtgtcacagagtgacacggaaggagacccactgatg
aacatgctaatgaggctgcaggaggcggctaactactccagcgcgcagagctgcgacagc
gacagcgccagtcaccatgacgaccagctggactcgtcgctggagtcggcgctctag
DBGET
integrated database retrieval system
