Salvelinus namaycush (lake trout): 120050213
Help
Entry
120050213 CDS
T07522
Symbol
spef2
Name
(RefSeq) sperm flagellar protein 2
KO
K25615
sperm flagellar protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120050213 (spef2)
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Sperm associated proteins
120050213 (spef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPEF2_C
SPEF2_D5
CH_2
ADK
AAA_17
Motif
Other DBs
NCBI-GeneID:
120050213
NCBI-ProteinID:
XP_038852765
UniProt:
A0A8U0R0L5
LinkDB
All DBs
Position
Sna1:complement(6234308..6286395)
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDILCRWLNVELRLSKTVDPRSISKDFANGYLIGEVLHKYQLQGDFDLFLKSNTANSKL
NNFTLMEPTLQLLGVSFDLSMAQAVMREQHGAATRLLYQLFILLQKKRKAGLTGTAMEAM
QPAATACLHRVENDIYSERLRTVVKREADLKLQKIALKYEIKGREIYDKSVMAHFVEQQR
RQKVQEEMRLQDIEKHRHARRKQHEIMTRIQTAIIQIPKPPPNRTLKALEKQQQNRKKQE
AQKVHMEIAQFEKIRKKLSPAGGFGTSSLRYVSHGSQLQRPEELAQANSEYIQKIRQRLE
EDAAARQQREKRRRRVLVEQMKAHEAQEEALREEQLVERLTRQSQLERRLAVQLMQLRQQ
KDVLRQNRVFRERQYQEQRLRDFQEALEREAALARQASLDHAEETRKEIELHDRIATERA
QARYRKHSDSCREILEQIVDLATKAGEYRLLTGNLIPGKLMREWKELMFCGKPLYDSGSL
EELPADPTPEQFIEVEKQEILNNQDYDEYMSMTGEWTWPEDGETKPPPSNNNILGHVVLR
LQTIVNPPKPDTLPPFFPRFTLKACVLGKLFSGKTTCLTRIAKVHHIHILSANVLIQEAL
DAHQLGRELSVRAQHGAAVEKFLRKGRSVPDELLVDIAVEAIRAIPADSGWILDGFPVDL
TQAKLLEKALGGSDTGKERKNKRSNLSVDSNAPKEPPPPSPVLDLALLLDVSDDHVLDRA
AKQAYEEERSGPAGAGEESCAPAREHNVVIARDKSLGKRQIQHRITAFQDTWPKLEKWFS
GKQSILMRLNAEMSEDMLFRKVESILYQVMMQSEKGEVVVLDSGKAPAVSTALVQVTPVA
VPAPTESTLTQEGLTPAVKCSSSKSNSRSPKGSQSNIEKSTSEGKDVHRGAVGHSRTLSI
ASSYENSHGGNTSPTEPLAPTPGTAHWVYVDEPLPKEIPEYLVPYWENVCNSYVTNVKAV
MQNLRTERILIIHHLFNIREEFKQYLRRPDLKQEFVSQWQQNYNSIPKDMRDDEETKAEL
HQRLDDLRERLWDICDKRKEEAGQERAAIMCDGWLEDHTAVLINHFSTLMQVEVDRFQDS
LRLLRDYYTGMYKQVLSEAGPEFTCIPLLDIVVLEEPGTQTDKSKSSERVTKSAGKRDSE
GDEKKKTKVVPLIPRRPPSTEVASMKQKGFQDPDEKLLHDIYQTALTAINNMVSVEAVQR
EAEENEEAQQQMDRQRLQRMSQASASAAAAANSGKDKKKAGTKKKGPPSPAQEPSPPPAP
EEDSEEVCKRAIRNKIRQEYAAALDHEDSAVKVRVELVKACALCMVRVLHRQAEQAFRTM
EEWLGARFLSEMNSIDQLAEVVRHHIESAAKLQSELMLVCTDFFLNGDMRVVVSPPNPPR
PAPLELPTDSTLTILQLEAFYRQLRKVAPTGVQCSTDFWEILQEITSLNMGTNALPDPWM
HISESQLVELVSTLTQNTEMLDWRQFLLSAALPWPTPTLPQLLQVLARFKMADAGATGSL
TEEQYLKVELWFPSERALSIPEDLSEPLPYDRLANLRKFFFLLFADPNCSPARVDYVTML
LYFAAHPDPMQGFVRALSVVMGQPLRHHSSSRLLKSVPYMEEGLSESTELEEEVETQGGP
RGEEGVSIPALLRAICHGGAWEACHNRFHPNWKSPDEYKEDFVKVYRELGYKVEDKIPFS
ILSQHPVIQDLIEGSAQYQLIDIHRALQVQQSEGEPLSLMVS
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatatattatgcaggtggctaaacgtagagctccggctatcaaaaaccgttgac
cccaggtccatctctaaggattttgcaaatggctatcttattggagaggtcctgcataaa
tatcaactgcagggggattttgacctgttcttaaagagcaacactgcaaactcaaagctg
aataacttcacactcatggaacccacattgcaactgctcggagtttccttcgacctgagc
atggcccaagcagtgatgcgggagcagcacggtgctgccacgcggctgctttatcagctc
ttcatactgctgcagaagaagaggaaagccggcctgacaggcacagctatggaggctatg
cagccagctgccacagcttgcctccaccgcgttgagaatgacatctactctgagcgcctg
aggacagtcgtcaagagagaggctgatctgaaactccaaaaaatcgctctgaagtacgaa
atcaaaggtcgagagatatatgacaagtctgtcatggcccactttgtggagcagcagaga
cggcagaaagtgcaggaagagatgagactccaggacattgaaaagcaccgacatgcacgc
agaaagcagcatgagataatgactcgaattcagaccgccatcatccaaattcccaaaccc
ccgcccaaccggacattgaaggccctggaaaaacaacaacagaaccggaagaagcaggag
gctcagaaggttcacatggaaatcgcccagtttgagaagatcaggaagaagttgtcacct
gctggcggctttggcacctcctctttgaggtacgtaagccatggctcccagttgcagagg
cctgaggagctggctcaggccaacagcgagtacatccagaaaatccgccagaggctggag
gaggatgcagcagctcgtcagcagagggagaaacgccgccgccgcgtcctagtggaacaa
atgaaagcccacgaggcccaagaggaggcccttcgagaggagcagctggtggagcgtctg
acccgtcagtcccagctggagagacgcctggccgtccagctcatgcagctccgccagcag
aaggacgttctccgacagaaccgagtgttccgcgagagacagtaccaagagcaacggctg
agggatttccaagaggccttggagagggaggcggctctagcacgccaggccagtttggat
cacgccgaggaaactcggaaggagattgagctacatgacaggatagcgacggagcgcgcc
caggctcgctacaggaagcactctgacagctgccgagaaatactggagcagatagtggac
ctggccacgaaagctggagagtaccgcctcctcactggaaatcttatccctgggaagttg
atgcgggaatggaaggagctcatgttttgcgggaagcccctgtatgacagtggcagtctg
gaggagctacctgctgaccccaccccagagcagttcattgaggttgagaaacaggagatc
cttaacaaccaggactatgatgagtatatgagtatgactggtgagtggacctggccagag
gatggggagacaaagccccccccatccaacaacaatatcctgggacatgtggtgctccgc
ttgcagactattgtgaacccccccaaaccagacacccttcctccgttctttcctcggttc
acactgaaagcctgtgtgctggggaagcttttctccgggaagaccacatgcttaaccagg
attgccaaagtccatcacatccacatcctgtcagctaatgttctgatccaggaggccctg
gatgcacatcagcttggacgtgagctctctgtgagggcccagcatggagcagcagtggaa
aagtttctcaggaaagggagatccgtcccagacgagctgcttgtggacattgcagtcgaa
gctatcagggcaatcccagcagactcaggctggattctggacggcttcccggtcgatttg
acccaggccaagcttctggagaaggccctgggaggctcggacaccgggaaggagaggaag
aacaagcggtccaacctgtctgtggatagcaacgcgcctaaggagccgcctcctccctct
cctgtgctggacctagctctgctgcttgacgtgtctgatgaccacgttttggacagggcg
gccaagcaggcctatgaggaggagaggtctggcccggccggggctggtgaggagagctgt
gcccctgctagagagcacaatgttgtcatcgccagggacaagagcctggggaagagacag
atccagcacaggatcacagccttccaggatacctggcccaagctggagaagtggttctct
ggtaaacagagcattctgatgagactgaatgctgagatgtcggaggacatgctctttaga
aaagtggaatccatcctgtaccaggtcatgatgcagtcggaaaaaggtgaggtcgttgtt
ttggacagtggaaaggcaccagcggtctcaactgctctcgtccaggtaactccggttgcg
gtcccagctcccactgagtccaccctcacccaggagggcctgactccagctgtgaaatgc
tccagctccaagtccaactctcgctcccccaaaggttcacagagcaacatcgagaagagc
acatccgaagggaaagatgttcatcgaggagccgtggggcattctaggacgttgtccata
gcctcctcctatgagaattcccatggtgggaacaccagccctacagagccccttgctccc
acccctggaactgcacactgggtgtacgtggacgagccccttcccaaggagataccagag
tacctggttccatactgggagaatgtgtgtaactcctatgtgactaacgtcaaggccgtg
atgcagaacctccgcacagaacgcatcttgatcattcaccatctgtttaacatcagagag
gagtttaagcagtacctccgacggcccgacctgaagcaagagttcgtgtcccagtggcag
cagaactataacagcatccccaaggacatgagagatgacgaggagaccaaggcagagctg
caccagcgtctggatgacctgcgcgagcgtctgtgggacatctgtgataagcgtaaggaa
gaagcggggcaggagcgggcggcgatcatgtgcgacggctggctggaagaccacacggcg
gtgctcatcaaccatttctccacactaatgcaggtggaagtggaccgattccaggactct
ctacgtctcctgcgggattactacacaggcatgtacaaacaggtgctgtctgaggcgggg
ccagaattcacctgtattccactgctagacatcgtggtgctggaggagccaggaacccag
actgacaaatccaagagttctgaaagagtcaccaagagtgctggtaaaagagactctgaa
ggagatgagaagaagaaaaccaaagttgttccactgattccccgcagacctccctctact
gaagtggcctctatgaaacagaaaggcttccaggaccctgacgagaagctgctgcatgac
atctatcagactgctctgacagccatcaacaacatggtgtcagtggaggcggtgcagcgc
gaggcagaggagaatgaggaggctcagcagcagatggatagacaacggctacagagaatg
tcccaagcctccgcctccgccgccgccgcagccaactctggcaaggacaagaagaaagct
ggcaccaagaagaaaggccccccctcccctgctcaggagcccagtccaccccctgcccca
gaggaagattcagaggaggtctgcaagagggccatacgaaacaaaatcagacaggagtat
gctgcagccctcgaccatgaagacagtgcagtgaaggtgcgtgtggagctggtcaaggcc
tgtgctctgtgcatggtgagggttctgcacagacaggcagagcaggccttcaggaccatg
gaggagtggctgggagcccgcttcctgtctgagatgaacagcattgaccagctggctgag
gtggtgcgtcaccacatcgagtcggccgccaagctccagagtgaactgatgctggtatgc
accgacttcttcctgaacggggacatgcgggttgttgtcagcccccctaaccctcctcgc
cccgcccctttggagcttcccacagacagtactctcaccatcctgcagttggaggccttc
taccgccagctacgcaaggtggcgcccacaggtgtgcagtgcagtactgacttctgggag
atcctgcaggagatcacctctctgaacatggggaccaacgctctgccagacccctggatg
cacatctcagagtctcagctggtggagctggtgtcgacgctaacccagaacacagagatg
ctggactggcgtcagttcctgctgagtgccgccctcccctggcccacccccactctgcct
cagctgctgcaagtgttggcccgcttcaagatggcggacgctggggccacagggtctttg
actgaggagcagtacttaaaggttgagttgtggttccccagtgagcgggcactgtccatt
cccgaagacctgtctgagccacttccttacgatcgcttggctaatctacggaagtttttc
ttcctgcttttcgccgaccccaattgttcgccagctcgtgtcgactacgtgaccatgctg
ctgtacttcgctgcccaccctgaccctatgcagggctttgtccgagctctcagtgtcgtc
atgggacagccacttcgacaccactctagcagtagacttctcaagtcggtgccttacatg
gaggaggggctgagtgagtcgaccgagctagaggaggaggtggagactcagggggggcca
agaggggaggagggggtgtccatccctgccctcctcagagctatctgtcacgggggagcc
tgggaggcatgccacaaccgcttccatcccaactggaagagtcctgatgaatataaagag
gactttgtgaaggtctacagagaactggggtacaaggttgaggacaagattccattctcc
atcctatcccagcatccggtcatacaagatctgatcgagggctccgctcaataccaactc
attgatattcaccgagctctgcaggtccaacagagcgaaggggagcctctgtctttgatg
gtgtcttaa
DBGET
integrated database retrieval system