Salvelinus namaycush (lake trout): 120050504
Help
Entry
120050504 CDS
T07522
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09380
zinc finger homeobox protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120050504
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120050504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_4
zf-C2H2
zf-Di19
zf-H2C2_5
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
120050504
NCBI-ProteinID:
XP_038853019
UniProt:
A0A8U0UI20
LinkDB
All DBs
Position
Sna7:complement(8707310..8739150)
Genome browser
AA seq
2505 aa
AA seq
DB search
MGMFIVNGSLQGDSYGVNSLSKESPGSNAVGKCSMLQEKQNDTPPKRPKSAEGKTSASEQ
LQQCPYCNYRSKDANRLQLHVVSQHSMQQPVICCPLCQDVLSNKIHLQLHLTHLHSVAPD
CVDKLLMTVAAPDVIVPNNMMHPSPGQDNALSLMEAPLSETSGKPTGNSSKDQTNSTGQG
KSEVDLLREELKPPKEGSEAPDWKRSGGVGQDRKSPDSLQDHLNNLQRRQQQQLSVSDRH
IYKYRCNHCSLAFKTMQKLQIHSQYHAIRAATMCSLCQRSFRTFLALRKHLENGHPELSE
AEVQQLCGSLPVNGDFVPESEARAYEEAQQAFEQEMDKDDELDLEEKASSTGSDSSLLLD
DMGAETKRTLPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKK
VLQEASSPVSPETNNNADNKPFKCNICNVAYSQSSTLEIHMRSVLHHTKARTAKTETSIS
SSSTGSGNTSGVAPSCIPAPTGQGNNANSETARSVTPLLNKENTIDAKESNNSSNNTKHT
TDHVSAQQSHQNAQSQAQLQMQLQHELQQQAAFFQPQFLNPAFYPQFGMTPETLLQFQQP
QFLFPFYIPGAEFNLSPELALHSAAAFGMPGLTGSFLEDLKQQMQQQHQLQQAQAQQQLQ
QQQQQQQASQLQLQQQKKQQLQSHKPKMEPNAVSVSDIHMSREAEERLEKQESKAKMENG
GDGVSEGGKDKKDKKSKFPEPLIPPPRIVSGARGNATKALLENFGFELVIQYNENRQKNQ
KKNKEGEQQKQQPQQQQLEINNDKLECGMCGKLFSNMLILKSHQEHIHGQFFPFGELEKF
SQQYREAYDKLYPINPPSPETPPPLAPLPPPSPVPVTTQQPPCTSMNKPQIKAPSPAPNQ
APQTQPPPPPPPPPPPSASPQMQPSIPLDFSLFPPLMMQSIQHQGLHPQLTMQLPTMDSL
SSDLTQLCQQQLGLDPNFLRQSQFKRPRTRITDDQLKVLRGHFDINNSPTEEQVQEMADM
SSLPQKVIKHWFRNTLFKERQRNKDSPYNFNIPPITTLEDIRLESQYSTLEYYRTDATMN
KRSTRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPSRVIVVWFQNARQKARKSY
ENQADAKDNERKELTNERYIRTSNMQYQCKKCSVVFPRIFDLITHQKKTCYKDEDEEGNE
DNQSEEYMDIGEPCAAKHPESSKHHHGTATSSGSSSPLMPSPHSNLEKTSPKPEPPSEPK
PKDPEPAPSPVMIKSLPDPRPSKASTPQPPPQPPPQKTPQPQMSRPHSQPQSATIPSSPL
SLALSSLTNSLSPQMLQYQCDQCKIAFPSIELWQEHQHMHFLAAQNQFLHSQFLERPMDM
PYMIFDPNNPLMTSQLLSGGLQMPTQSGSGLPSGPCSGSMKRKLDEKEDGSNEKDNGNMT
EEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRAR
ERKGQFRALGASQSHKKCPFCRALFKAKSALDSHICSRHWHEAKQAGFSLPNSPMMNQDD
GGESPHKYNFFEYSQLPTKTEPNEYELPAASSTPVKQSEAPLKNLMSPSSLKAENCDESE
GLNINSAEASSYDINNKMDFDETSSINTAISDATTGDEGNNNELESLTVNGGDKLTCDSK
SNLAQSPDGGDDHFPFSMMSPSLSYSGKDGDSCSYSYSYYSSRDDDMDDNNDQSETSSLT
DPSSPSPFGSGDPFRSGKGSSSGGERPGHKRFRTQMNNLQLKVLKACFSDYRTPTMQECE
MLGSEIGLPKRVVQVWFQNARAKEKKFKINIGKPFMISQGGPDGPRPECTLCNVKYTARM
SIRDHIFSKQHIAKVQETLVNQVDREKDYLAPTTVRQLMAQQEMDRLKKAGSDGLSNLAA
QQLQTAVNHNNALHGLSLPSGYPGISSLPPVLLPGVTGPSSLPIYPPNTPALASPGAGML
GFPTPATPSPAMSLSTTPNKNLLQTPPPPPLPPVSSTPLTSTNHIEQHSKYQERESNNNS
SSKKPAEKPPHQKKAKEREAENGGRPQTPNVSNNKKREKPSPASAKPGREGHLDAAQLQA
LQNALTGAADPSSFLGGQFLPYFLPGFANSFSPQLLGGMQAGGYFPPFGGMENLFPYGPA
AIPQAAMAGMNPTALLQQYQQYQQSLQDSLQKQQQQQQHQKHIEQQKQHHKQPKQKPAPV
KASSPIVQSNPKSFKPKLSMGTKDDTNNNKCSLTESTKEPPTETKRTTDFPDAFIIPSVK
HQFICRKCQMVFADEDSAVHHQKSFCYFGKPFPDPQETVLRKAVSKYRCIACNVVVNGNE
ALGQHLQLSLHKEKTIKQAMRNAKEHARLLPHSVCTPTPGKTTSTSQSAAPPSNNTFPHL
SRLAIKSWPDIFFQATARKAASSSSSSLSASPIPPLSLPLMVTSTSCSSVSGVPTSLPNE
SCSDESDNELSQKLDDLDKVLEAKAKSTSGLDAGFSSIRMDMFSV
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgttcatagtcaatggtagtcttcaaggggactcatacggtgtgaactctctg
tctaaagagtctcctggatccaacgctgtgggaaaatgttccatgctccaagagaaacag
aatgacaccccgcccaaaaggcccaagtctgcagaggggaagaccagcgctagtgagcag
ttacagcagtgcccctactgtaactacaggagtaaagacgccaacaggttacagctccac
gtggtatcccagcattccatgcagcagccggtgatctgctgcccactgtgccaggacgtc
ctcagcaacaagatccacctgcagctccaccttacacacctgcacagcgtggctccggac
tgtgtcgacaaactactcatgactgtggctgcgcctgatgtgatagtgcccaataacatg
atgcatccttcacctggacaagacaacgctttgtctctgatggaagctcctctctctgag
acgtctggaaagcccacagggaacagttccaaggaccagacgaacagcacaggccaaggc
aaaagtgaagtagaccttctacgagaggaactcaaaccccccaaggaggggtctgaagct
ccagactggaagaggtccggtggggttgggcaggatcgaaagagccctgactccctccag
gatcatctgaacaacctccagagacgccagcagcaacagctctcagtctctgaccgccac
atctacaaataccgctgcaaccactgcagcctggccttcaaaaccatgcagaagctgcag
atacattcccagtaccatgcaatccgggcagcaaccatgtgcagtctctgccaacgcagc
ttccggacattcttggcgctccggaagcacctggagaacggacatccggagctgagcgaa
gccgaggtccaacagctctgcggcagcctgccggtaaacggagacttcgtccccgagagc
gaggccagggcctacgaagaggcacagcaggcctttgaacaggaaatggataaagacgat
gagctggacctggaagaaaaggccagctcaacaggaagtgacagtagcttgttgctagat
gacatgggagctgaaacaaagcgaaccctcccatttagaaaaggccccaacttcaccatg
gagaagttcctggacccgtcccggccatacaagtgcacggtgtgcaaggagtccttcacc
cagaagaacattcttctggtacattacaactccgtctctcacctgcacaagctgaagaag
gttctccaggaggcctccagcccggtttctcctgagaccaacaacaatgccgacaacaaa
ccattcaaatgcaatatctgcaacgtcgcctacagccaaagctcaaccctagagatccac
atgaggtctgtgctgcatcataccaaagccagaactgccaaaacagagacaagcatcagc
agtagcagtacagggagtgggaacactagtggcgtggctccatcctgcatcccagcccca
accggacaaggcaacaatgccaactcagaaactgctagaagcgtgacgccattgcttaac
aaagaaaatactatagatgccaaagaatccaacaacagcagcaacaacacaaagcacact
actgatcatgtctctgcacagcaaagccatcagaacgctcagtcccaagctcaactacag
atgcagctccaacacgagctccagcagcaggctgcctttttccagccccaattcctcaac
ccggctttttacccccagttcggcatgaccccagagactctgcttcagttccagcagcca
cagttccttttccccttctacatcccaggggcagaattcaacctgagcccagagctggca
cttcactcagccgccgccttcgggatgccgggcttgactggttctttcctggaagacctg
aagcagcagatgcagcagcaacaccagctacagcaggctcaggctcaacagcaactacaa
cagcagcaacagcagcaacaagcatcccagttgcagctccagcagcaaaaaaaacagcaa
ctgcagagccacaagcccaaaatggagcccaatgcggtgtcagtgtctgacatacatatg
tccagagaggcagaggagcgactggaaaaacaggagagcaaagccaagatggagaatgga
ggggatggagtcagtgagggaggaaaggacaaaaaagacaaaaagtccaagtttcctgag
ccgctgattcctcctccacgtatcgtgtcaggagccagaggaaatgcaaccaaggccctt
ctggagaactttggatttgagctggtcatccagtacaacgagaacaggcagaaaaaccag
aagaaaaacaaagaaggagaacaacaaaaacaacaaccacaacaacaacaactggagatc
aataacgacaagctggaatgtgggatgtgtggaaagctcttctccaacatgcttattctc
aaaagccaccaagagcacatccatggacagttctttccttttggagagctggagaagttt
tcccagcagtacagagaggcctacgacaagctctaccccatcaaccccccttcccccgag
actcccccacctctggctccccttcctcctccctcaccagtcccagtgaccacccagcag
cctccctgcacctccatgaacaagccccagatcaaggccccatcccctgccccaaaccag
gctccacagacccagccaccaccccctcctccccctcctccaccaccctccgcatcccca
cagatgcagccttccatcccactagatttctccctcttcccccctctgatgatgcagtcc
atccagcaccaagggctacaccctcaactcaccatgcagctgcctacaatggactccctg
tcctcggatctcacccagctttgtcagcagcagctaggtctcgatccaaacttcctgagg
cagtcccagttcaagcgccctcgaacccgcatcacggacgaccagctgaaggtcctcaga
gggcactttgacatcaacaactcgcccactgaggagcaggttcaggagatggctgatatg
tccagcctccctcagaaagtcatcaagcactggttccgtaacaccctcttcaaagagagg
cagcgaaacaaagactctccttacaacttcaacattccacctattaccacgttggaggat
attaggctggagtcccagtacagtacactggagtactacaggactgatgccaccatgaac
aaaaggtccaccaggacaaggttcactgactaccaactgagggtcctacaggacttcttc
gacacaaatgcttacccgaaagatgatgagattgagcagctgtccaccgtgctcaacctg
ccgtcaagggtcatcgtggtgtggttccaaaacgcccgccagaaggcccggaagagctat
gagaaccaggcagatgctaaagacaacgagaggaaagaactgacaaatgagcgctacatc
cgcaccagcaacatgcagtaccagtgcaagaaatgtagtgtggtgttcccacgaatcttc
gacctgatcacccaccagaagaaaacgtgctacaaggacgaggatgaggaagggaatgag
gacaaccagtctgaggagtacatggatataggagaaccatgcgcagccaagcaccctgag
tcatccaagcatcaccatggaacagccactagctccggctccagttcccctctgatgccc
tcccctcactccaacctggaaaagacatcccccaagcctgaaccgccctctgagcccaag
cctaaagatccagaacctgccccttctccagttatgataaagtctctaccggaccccaga
ccctccaaggcctccacccctcagccaccccctcagccacctcctcagaagaccccccag
ccccagatgtccagaccccactcccagcctcagtcagccaccatcccctccagccccctc
tctctggccctctcctccctcaccaacagcctctctccccagatgctccaataccagtgt
gaccagtgcaagatagccttcccaagcattgagctatggcaggagcaccaacatatgcat
ttcctggcagcccagaaccagttcctccattcccagttcctggaaaggcccatggacatg
ccctatatgatcttcgaccccaataaccctctgatgactagccagcttctgtctggagga
ctccagatgccaactcaaagcggctctggtttgccgtcaggtccctgctctggctccatg
aagagaaaactagatgagaaagaggatggatccaatgaaaaagataacggaaacatgact
gaagaacagcacagagacaaacgtctcagaaccaccatcaccccagaacaactagagatc
ctctatgacaaatacttgctggactccaaccccacaaggaagatgctggatcacatcgcc
cgtgaggtcggcctgaagaagagagtggtgcaggtgtggtttcagaacacacgtgcccga
gagagaaagggacagttcagagcattgggggcctcccagtcacataagaaatgccctttt
tgccgggcgctgttcaaggccaagtcagctttggacagccatatctgctctagacactgg
catgaagccaaacaggcagggtttagtctgccaaatagcccaatgatgaaccaagatgat
ggaggcgagagcccgcacaagtacaacttctttgagtactcgcagctgcccaccaagact
gagccgaatgagtacgagctgcccgcagcttcctcaacgccagtcaaacaatctgaggca
ccgttaaaaaacttaatgagcccttcatccttaaaagcagaaaactgtgatgaatctgaa
gggcttaacattaattctgcagaggcctcatcctacgacatcaataacaaaatggacttt
gacgagacctcatccatcaacacggccataagtgacgccaccactggagatgagggcaac
aacaatgagctggagagcctcacggtcaacggaggggacaagctgacctgcgacagcaag
agcaaccttgcccagagcccagacggtggcgacgaccacttccccttcagcatgatgagc
ccctccctcagctactccggcaaggacggagactcctgctcctactcttactcctactac
agctccagagatgacgacatggatgacaacaacgaccagagcgagacctccagcctgacc
gaccccagctctcccagccccttcggaagtggagaccccttcagatctgggaagggtagc
agcagtggtggggagagaccaggccacaagcgcttcaggactcagatgaacaaccttcag
ctgaaagtcctcaaggcctgtttcagtgactaccgcacccccaccatgcaggagtgtgag
atgttgggcagtgagatcggcctccccaagcgtgtggtgcaggtgtggttccagaacgcc
cgcgccaaggaaaagaagttcaaaatcaatattggaaagccattcatgatcagtcaaggc
gggccggacgggccccggccggagtgtactttgtgtaatgtgaagtacactgcccggatg
tccatccgcgaccacatcttctccaaacagcacatcgctaaagtgcaggagaccctggtc
aaccaggtggacagagagaaggactacctagcgcccaccacggtccgccagctgatggct
cagcaggagatggatcgtctgaagaaggctgggagcgacgggctcagcaatcttgctgcc
cagcagcttcagactgcagtgaaccacaacaatgcacttcatggcctcagcctgccctca
ggctatcccgggatctctagcctcccgccggtactacttcctggggtcaccgggccatcc
tcacttcctatttacccacccaacacacctgctttagcatctcctggtgctggcatgctt
ggattcccgaccccagccaccccctctcctgccatgtctctgagcactaccccaaacaag
aatcttctgcagactccacctcctccacctcttcctcctgtttcctctacccctctgact
tcaaccaaccacattgagcagcacagcaaataccaagaaagagagagcaacaacaacagc
agcagcaagaaaccagcggagaagccgccccaccagaagaaggccaaggaaagagaagcg
gagaacggcggccgtccacagacccccaacgtcagcaacaacaaaaagagggagaagccg
tctccagcctcggccaaaccgggacgtgagggtcatctggatgccgctcaactacaggct
cttcagaatgccctgaccggcgcagcagacccaagctccttcctgggaggtcagttcctg
ccttacttcctcccgggcttcgccaacagcttttcgccacagcttcttggagggatgcag
gcggggggatacttccctccgttcggcgggatggagaacctgttcccctatggacctgcc
gccatcccacaggccgccatggcgggcatgaatcccaccgccctcctgcagcagtatcag
cagtaccagcagtccctccaggattccctacagaagcagcaacagcagcagcaacaccaa
aagcatattgagcaacaaaaacagcatcataaacagccgaagcagaagccagctcctgtg
aaggcgtcatcaccaattgtgcagagcaaccccaagtctttcaaaccaaaactatctatg
ggaactaaggatgacaccaacaacaacaaatgctctttgacggaaagcacaaaagaaccg
ccaacagaaaccaaaagaaccacagacttccctgacgctttcatcattccatctgtcaag
caccagttcatatgcaggaagtgccagatggtattcgctgatgaggactccgcagtgcat
caccagaagtctttctgctacttcggaaaaccttttccagacccgcaggagacagttctt
agaaaggcagtgagtaagtacaggtgcatcgcctgcaacgtggtggtcaacgggaatgaa
gcacttggccaacacctccagttgagcttgcacaaagagaaaacaatcaaacaagcaatg
agaaatgccaaagagcatgctagattattacctcactctgtctgcacccctactcctggc
aagaccacatctacctcgcagtctgcagctcctccttctaataacacctttccccatctc
tctcgcttggccatcaagtcctggccagatatctttttccaggccactgcccggaaagct
gcttcctcctcctcctcctccctgtctgcgtctcctattcctcccctttcattgcctcta
atggttacctcaacgtcctgcagcagcgtctcaggggttcccacctccctacccaatgag
agttgttcagatgagtctgacaacgagctgagccagaagctggatgacttagataaggtg
ttggaggccaaggctaagtcgacctccggcctagatgcaggcttcagcagtatcagaatg
gatatgttcagtgtgtag
DBGET
integrated database retrieval system
