Salvelinus namaycush (lake trout): 120050508
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Entry
120050508 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120050508
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120050508
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120050508
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120050508
03036 Chromosome and associated proteins [BR:
snh03036
]
120050508
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120050508
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120050508
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120050508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
120050508
NCBI-ProteinID:
XP_038853025
UniProt:
A0A8U0UHH9
LinkDB
All DBs
Position
Sna7:50395885..50406779
Genome browser
AA seq
537 aa
AA seq
DB search
MFIKESKETLRGDPDLRCELAFLSRGCDFVLPSRFKKRIKTFQQLQAQVQSNKQDKKPGT
PPPAPLSPTPYVPPPHRSPSPPPTPVILTPPPPPPPPPPALNIPRFYYPRGLPGATKVNH
DAAISAIEKAFTEFEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIA
TWRKLLHSCYDDSSKFIYLLAKPGCTYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRY
ITTVIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYC
KFWELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFL
ISEEDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQM
LDLVKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSD
WDKYASEEYEILVAEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcaaggagtctaaagagacactgcggggggaccctgatctaagatgtgagcta
gccttcctctcccggggctgtgacttcgtactgccctcgcgcttcaagaagagaatcaag
acgttccagcaactgcaggcgcaggtccagtccaacaagcaagataagaaacctggcacc
cctcctccagcccctctctcccccaccccctacgttcctcccccccaccgctccccctct
cctccccccactccagtcatcctcacccctcctcctccacctccccctcctccccctgcc
ctcaacattccccgcttctactaccctcgagggttaccgggggcaacaaaagttaaccac
gatgcggccatcagtgccatagaaaaagccttcacagagtttgaggaggagaaggctgat
atttacgagatgggcaagatcgctaaggcatgcggctgtcctctgtactggaaggcagcc
atgtttaacggagcgggaggagagaggaccggcttcgtctctgttcactccttcattgct
acctggagaaagttgttacatagttgctatgacgattcgtctaagtttatctacctccta
gcgaagcctggctgtacctacctggaccaggaggacttcatacctttattacaggacata
gtggacacccacccgggactgacgttcttgaaggatgccccagaatttcattcccgttac
atcaccaccgtgattcagcggatattctatgtggtcaaccgctcatggacgggtcgcatc
accatgacggaactacgcaggagcaacttcctgcagaccctggcactgttggaagaggag
gatgatatcaaccagataacagattatttctcttatgagcatttctatgtgatttactgt
aagttctgggagttggacacggaccacgacctttacattgaccctaaggacctggctcgt
tacaacgaccacgcatcctcaagcagaatcattgagaggttgttctcaggagctgttaca
cggggtagctcagtgcagagagaagggaggatgagttatgcagagttcagctggttcctc
atctcagaggaagacaagaaaaaccctacaagtatagagtactggttcaggtgtatggac
acagatggggacggtgtgttgtctatgtttgagttggagtacttctatgaggagcagtgt
agtaggatggaggggatgggcattgaacccctacccttcacagacctgctctgtcagatg
ctagaccttgtcaaacctgaaagccaaggtaagataaccctgtctgatctgaagaggtgt
aggatggctcatatattcttcgacacgttcttcaacctggagaaatacctggaccacgag
cagagagaccccttcgctttgcagaaggacatagacaacgagtgtccagagccttcagac
tgggataaatacgcttcagaggagtatgagatcctggtggcggaggagacggctaacgaa
cagctgcaggaggggacgtttgatgatgactatgaggaggcggagcttcctgttcaagga
gagatggttgggaataagatggataagctgctcatatcagatctgtcagcatga
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integrated database retrieval system
