Salvelinus namaycush (lake trout): 120050540
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Entry
120050540 CDS
T07522
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120050540
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120050540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120050540
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120050540
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Claudin_2
Motif
Other DBs
NCBI-GeneID:
120050540
NCBI-ProteinID:
XP_038853056
UniProt:
A0A8U0R2N0
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Position
Sna7:55255186..55275684
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AA seq
460 aa
AA seq
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MFYLKVHTLLVGILVVLAGSARCSEDETRLVKTLFTGYNKVVRPVNHFRDPVVVTVGLQL
IQLISVDEVNQIVTSNVRLKQIWEDVNLKWNPDDYSGIKKIRIPSTDIWRPDLVLYNNAD
GDFAIVHETKVLLEHTGLITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVV
VNPDNDRPDLSNFMESGEWVMQDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIVITVIVINTHHRSPSTHTMPQWVRKLFIDTIPNFMFFSTMNRPSRDRQ
EKRIHPTDFDISDISGKPAPASVTFQSPITKNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTMGVFAGRLIELSMQD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttgaaggtacacactcttcttgttgggattctggttgttttagcaggttca
gccaggtgttcagaagatgagacgcgtctggttaaaaccctgttcaccggctataacaag
gtggtccgccctgtcaatcacttcagagatccggtggtggtgactgtaggcttgcagctc
atccagctcattagtgtggatgaagtcaatcaaattgtgaccagtaatgtgcggctgaaa
cagatatgggaggacgtgaatctgaagtggaaccctgatgattatagtggaattaagaag
atcagaatcccttccacagacatctggcgtcctgacctcgtgctctataacaatgcagat
ggagactttgcaatcgtccatgagaccaaggtgctgctggagcacacaggtctgatcacc
tggaaccctccggccatctttaagagctactgtgagatcattgtgcttcacttccccttc
gacctgcagaactgcagtatgaagctggggacatggacctacgacggcaacctggtagtg
gtcaacccggacaacgaccggcctgacttgagtaacttcatggagagtggtgagtgggtg
atgcaggactataggagctggaagcactgggtgtactatgcctgctgccctgacacgccc
tacctggatatcacctaccacttcctgatgctgaggctgcctctctactttatcgtcaac
gtcatcatcccctgcatgctgttctccttcctgactggactggtcttctacctccccact
gactctggtgagaagatgaccctgtctatctctgtcctgctgtctctcactgtgtttctg
ctagtcatcgtggagctcatcccctccacctccagtgcggtgcctctcattgggaagtac
atgctcttcaccatggtcttcgtcatagcttccatcgtcatcaccgtcatcgtcatcaac
acacaccaccgctctcccagtacacacacaatgccccagtgggtccgcaagcttttcatc
gacaccatccccaatttcatgttcttctcgactatgaaccgtccatccagggacaggcag
gagaagaggatccacccgactgactttgacatctccgacatctcgggcaagcctgcccct
gcctctgtcaccttccagtcccccatcaccaagaacccggacgtccgcagcgccatcgag
ggggtcaagtacatcgcagagaccatgaagtctgacgaagagtctaacaatgctgctgag
gagtggaagtttgtagccatggtcctggatcacatcttgctgtgtgtgttcatggctgtg
tgtatcatcggcaccatgggagtgtttgctggacgtctcattgagctgagcatgcaggac
taa
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