Salvelinus namaycush (lake trout): 120050550
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Entry
120050550 CDS
T07522
Name
(RefSeq) claudin-10-like
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecule (CAM) interaction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120050550
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120050550
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120050550
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120050550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120050550
04147 Exosome [BR:
snh04147
]
120050550
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120050550
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120050550
Exosomal proteins of colorectal cancer cells
120050550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
120050550
NCBI-ProteinID:
XP_038853068
UniProt:
A0A8U0UHQ8
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Position
7:complement(47945854..47947500)
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AA seq
328 aa
AA seq
DB search
MKIRVMQIWGFLMTVLGWIFVACTMAMEGWKVTSIGGMGGSAVIKVAWYWSNLWKACFTD
STSVTNCQDFPVLWSVDNHIQIVRGLLMGALSLGMLGFVLSLIGMECTFLGGKDKAKYRK
LFTGGVCHIISGFLAASGYAVYAKYVSGEYFNPYFEGLKFDLGTPLFLGWVGSAFHMTGG
WFYLVSVCKLLCGDASKTIVIPELPEVESDQAKSTTVQSPVSQITSKIKVSSASKISSKA
AHSDVSAISSKSGQSGRASKSERSGRSSNSGQSSKSGGGSLTSGRPSRSRSHGSVHSEVS
SGSSSTVSSLSSGSRRSEREPFIKNSYI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgcgtgatgcagatctggggcttcctgatgacagtgctgggctggatcttt
gtggcatgcaccatggccatggagggctggaaggtcacgtccatcgggggcatgggcggc
tcggctgtcatcaaggtggcctggtactggtctaacctgtggaaggcctgcttcaccgac
tccacttctgtcaccaactgccaagacttccctgtgctctggtccgtggacaaccacatc
cagattgtgaggggcctgctgatgggtgctctgtctttggggatgctggggttcgtactc
agtctcattgggatggagtgcaccttcctcgggggcaaggacaaggcgaagtacaggaag
ctcttcactggaggagtctgtcacatcatcagcggctttctggctgcgtcgggatatgct
gtctacgcaaaatacgtctccggggaatacttcaacccctattttgaaggtttaaagttt
gacctggggactcctctgtttcttggctgggtgggatcagctttccatatgacagggggt
tggttctacttggtctctgtgtgcaaactgctctgtggggacgcgagcaaaactatagtc
atccctgaacttcccgaggttgagagtgaccaggccaagtccaccacagtacagtcccca
gtatcccagatcacctcaaagatcaaggtttcatctgcatctaagatttcttccaaagct
gcacactcagatgtgtctgccatctcctcaaagtctggtcagtccggtcgcgcgtccaaa
tcagagcggtctgggcggtcctcaaactccgggcagtcctcgaaatctggcggtgggtct
ttgacgtctggtcgtccatcgaggtcgaggtctcatgggtcagtgcactctgaggtgagc
agcggcagcagtagtacagtgtcctctttatccagtgggtcaaggaggagcgagagagaa
ccgtttatcaaaaactcctacatatga
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