Salvelinus namaycush (lake trout): 120050697
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Entry
120050697 CDS
T07522
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120050697
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120050697
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120050697
NCBI-ProteinID:
XP_038853198
UniProt:
A0A8U0QZV0
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All DBs
Position
Sna7:complement(30594605..30625202)
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AA seq
806 aa
AA seq
DB search
MGDRLHHYLGGGRPVYTLLLSLALALLTLLSEAQGRMDKARSEEESRAGLLRRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYQLQAQAWNRQTDRPLEPKSEFIVKIQDINDNEPKFQDGPYQATIPEMSTIGTE
VIRLTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVVRVSLAGMDREVREIYSIIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVLESAPVGSVVGCIRAKDRDI
GINAEMRYSIIDGDGRDTFDISTDPTNLFGIITIKKPLNFESKASYTLKIEGVNTHLDHR
FLDKGPFSHVTIVHVSVEDIDEPPEFSSAAYYIEVSEEAEIGTVFKTVSARDPDASNNSI
RYSIEMTTDLGKYFYIDITSGALMTVLSLDREELSWHNITVLAMEMSNPSMIGSVSVAVK
ILDVNDNPPSLTQYFEAFVCESAKAGQLIQTVTAIDPDDPLGGQHFYYSLAPEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDRELPVQTSTSTLTIRVCSCDVEGNV
MSCNAEAYHLPASLSRGALIAILACIFVMLVMILLMLSLRSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPHEAHLVGKQRQDMLPEIESLSRYVPLACVGWPGSVCV
GGDSNVQGYVLSKLLEADLDTCAPPYDSLQTYAYEGEGSVAESLSSLQSVCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETSNPPMW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgacttcaccactatcttgggggtggtaggcctgtctacaccctactactc
tcactagctctagccctgctgaccctgttgtctgaggcccagggccgtatggataaagcc
aggtcagaggaggaaagtagagcagggctgttgaggagggtgaaaagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctatacattggaaagctc
cactcagatatggacctaggggatggctcaatcaagtacatactatcaggagatggtgct
ggcaccaccttcaccattgatgacagtacaggagacatccatgccatcaagaggctggac
cgcgaggtcaaggcccagtaccagctgcaagcccaggcctggaacagacagacagaccga
cccctagagcccaaatctgagtttattgttaagatccaggacatcaatgataatgaacct
aagttccaggatgggccctaccaagccaccatacctgagatgtcaaccatcggcactgag
gtgattcggctgaccgctacagatgctgatgaccctacatatggtaacagtgccagagtg
gtctacagcattctgcaaggacagccatacttctctgtggagcccaagactggcgtggtg
cgtgtgtctctggcgggcatggaccgagaggtcagagagatctactccatcatcatccag
gccaaggacatgggaggccagctagggggtctggctggaaccactgtcgtcaacatcacc
ctcagcgacgtcaacgataacccacccatgtttgatcagaagctgtatcagatgagtgtt
ctggagtcggctcccgtggggtctgttgtgggttgtatccgggcgaaggatcgtgacatt
ggcatcaatgcagagatgaggtatagcatcattgacggagacgggagggacaccttcgac
atcagcacagaccccaccaatctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagagcaaagcaagctacactctgaagatagaaggagtcaacacacacctggaccaccgt
tttctggacaagggcccgttcagccatgttaccattgttcacgtcagcgtagaggatata
gacgagcccccagagtttagctctgctgcgtactacatagaggtctctgaagaagcagag
atcggcacagtgttcaagacggtctctgccagagaccctgatgcttccaataactccatc
aggtattccatagagatgaccaccgacctggggaaatatttctacattgacatcacttcc
ggggcgttgatgacggtgctatcgctggacagagaagagttatcctggcataacatcacc
gtcctggcaatggagatgagtaatcccagtatgatcgggagtgtgtctgtagctgtgaag
attctggacgtgaatgataaccctccatcgctgacacagtactttgaagctttcgtctgt
gagagtgccaaggctggacagctgattcagacagtgacggcaatagacccagatgatcct
ctgggaggtcagcacttctactacagcctggcaccagaggctgctaacaaccccaacttc
accctcagagacaatcaagacaacacagcatggatcctgacgcggcgtgggggctggtct
cagcaggaccagtcagtctactaccttcctatctttatctcagacagagagctgccggtc
cagaccagcaccagcactctgactatccgtgtgtgtagctgcgatgtggagggcaacgtt
atgtcctgtaatgctgaggcctaccacctaccggctagtctgagcagaggggcactcatc
gccatactggcatgtatctttgtgatgctcgtgatgatcctgctcatgttgtccctccgg
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccacgagaacatcgtc
cgctacgatgacgaggggggcggagaggaggacaccgaggccttcgacatcgctgccatg
tggaacccccacgaggcccacctagtggggaagcaacgtcaggacatgctgcccgaaatc
gagagcctttcacgctacgttccccttgcatgtgtgggctggccagggagtgtttgtgtt
ggtggagacagcaacgtgcaggggtatgtgctatccaagctcctggaggcggatttggac
acctgcgccccaccttacgactccctacagacctacgcctacgagggggagggatcggtg
gctgagtccctgagctcgctgcagtctgtgtgctccaatactgatcacgagtatgattat
ctcaatgactgggggcccaggtttaagaaactggcagagatgtacggggttctggagaca
agcaaccctcccatgtggtag
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