Salvelinus namaycush (lake trout): 120050710
Help
Entry
120050710 CDS
T07522
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120050710
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120050710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
EGF
EGF_LRP2
PLDc
Motif
Other DBs
NCBI-GeneID:
120050710
NCBI-ProteinID:
XP_038853208
UniProt:
A0A8U0R1L7
LinkDB
All DBs
Position
Sna1:complement(18340836..18349275)
Genome browser
AA seq
1334 aa
AA seq
DB search
MAFCLLLCIAILEITVLSAAAQIPLNCNLGTKPCKDGSECVLHQHVCDGEADCRDGSDEE
DCTVACNNGQFLCAHGKKCIDQQQVCDGVAQCQDRSDELDCLNPMEGCVHHCDNKTRCLP
DTFLCDGEWDCLDGTDEFNCGNAPSDGNNGNTTMSAPAPPKCPFGTKPCRDRIECVLYNH
VCDGEADCKDGSDEEECILECEHGQFQCAHGKKCIDQRQVCDGVAQCQDRSDEMACLKPM
EGCTHHCDNTRCLPDTFLCDGERDCLDGTDEANCADDSCNSGEFRCTSGQCLSVSMRCDG
HPDCRDRSDEESCTKPPQCTTKLRCPQSQECLLEEWVCDSEQDCKDGSDEKNCKMVQLKC
GDFQWACTSKSQCVPKAWRCDGTKDCADESDEAGCGQVATCPSHQFQCGSTWECLDTALV
CNTVRNCANGSDEGGNCQAKCPDKTQCAHNCYSTPQGTRCGCKVGYRLQEDTVSCVDIDE
CEGGRPGVCSHLCVNTQGSFQCHCYLGYLLESDGRRCKIAGEPYLLASVQTELFLFGLRS
SSLDVLVSSAKKAILSLDYDWRDQKVFWVSLDSESIKWSSLDQKKRGTLVKGIKSDCIAV
DWVGRNLYWIDGIGGGRIIAVGLNSLDQTVILDEDFEQPRSLALLPQKGIMFWSEIGNEA
KIERAGMDGSERRVVVSHSLSWPGGLAVDTLGERIYWTDEKLRCIGSANLDGGDIELLQM
METTNPFSVTVYNDLLYWSDTRRRTIQRAHKITGKNRKVLLKRPGQPFGLKIIHPLLQTS
NESPCENLRCSHLCVLGPGPKGVCKCPSGLLLAEDGLTCTNLVNSPFLLVLSPTVVTQIY
LQTMHSAVGLKSWPEHLALPLPNVNEAAMLDYTLQDQTLYLADSGQSSVVLFKLKETGLV
PRGQFLQLKGDTVTALALDWITLSVYWSSTKQPRLQVTSSSGEHTAVLIQDIGSLESIAL
HPLSGRLCFTNLAKQGEGAQVECAYMDGVKRAPVWKDALQPTSLTFSNKGNEIYWADIGY
GVIGSVRVDGTGYKEFKTGDGLTAFALSNGMLLWVTDSDTTKVWYRDDPLTKKLWFEVNT
EIVSLKAYSKSSQMGSNLCSDGNGDCSHLCLALPGGRTCRCAHDHWPVNVTHCAADHHCP
AGSRPCLDGHTCFPLEKFCDGHPDCSDTSDENCESSFHYQWNSVKAKAPTQLPSPSFPIS
ADPGSTSLDNSWLVRNLDAQQCSEKRCNGNGECVETNGGVSCACGLGYSGDSCQDQLTKT
MQGPLIYGAVGLCAGIVVISVLAALVKRKTANTRRANHVAKQTSMTELEKGEEAPSTQPS
PNSDFAEEVVSSVD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggctttctgtttgcttctttgtatagcaattttggaaatcacagtattgagtgcagca
gcgcagatcccattgaactgcaacctgggcaccaaaccttgcaaggatggatctgagtgt
gtactccaccaacatgtgtgtgacggagaagccgactgtagggatggttctgatgaggag
gactgcactgtcgcatgcaataatggccagtttctgtgtgcccatgggaagaaatgcatt
gaccagcagcaggtgtgtgatggtgtggcccagtgtcaggaccgctctgatgagttggac
tgcctgaatcccatggagggctgtgttcaccactgtgacaacaagacccgctgcctccca
gacaccttcctctgtgatggagagtgggactgcctggatggcactgatgaattcaactgc
ggtaatgccccctcagatggcaacaatgggaataccacaatgtctgcaccagcacccccc
aagtgtccttttggcactaaaccatgccgggacaggattgagtgtgttctttacaaccat
gtgtgcgatggagaggcggactgtaaggatggctcggatgaggaagagtgtatattagaa
tgtgaacatggccagtttcagtgtgcacatgggaagaaatgcattgaccagaggcaggtg
tgtgacggtgtggcccagtgtcaggaccgctctgatgagatggcctgcctgaagcccatg
gagggctgtactcaccactgtgacaacacccgctgcctcccagacaccttcctctgtgac
ggagagagggactgcctggatggcactgatgaggccaactgtgctgatgatagctgcaat
agtggtgagttccgttgcaccagtggtcagtgtttatccgtaagcatgcgctgtgacggg
catcctgactgtcgggatcgctctgacgaggagagctgcaccaagcccccccagtgcacc
accaagctccggtgcccacaaagccaggagtgcctgctggaggagtgggtctgtgatagt
gagcaggactgtaaagatggctctgatgaaaagaattgcaagatggtccaattgaagtgt
ggtgatttccagtgggcctgtacatctaagagccagtgtgttcccaaagcatggagatgt
gatggaacaaaggactgtgctgatgaaagtgatgaggcaggatgtggtcaggtagcaaca
tgcccttctcaccagttccagtgtggtagtacatgggagtgtttggacacagccctggtg
tgtaacacggtcaggaactgtgctaatggttctgacgagggtggcaactgccaagccaag
tgtccagacaaaacccaatgtgcccataactgttacagcacaccacagggaacaaggtgt
ggctgtaaggttggttaccgactccaagaggacacagtgtcctgtgttgatattgatgag
tgtgaaggtggtagaccaggtgtttgcagccacctatgtgtcaacacccagggctccttc
cagtgtcactgctaccttggttacctgctggaatctgatggccgccgctgcaagatcgca
ggtgagccctacctactggcctctgtgcagactgagctgttcctgtttgggctgagaagc
agcagtctggatgtcctggtgtcctctgctaagaaagccatcctgtccctggactatgac
tggagggatcagaaagtgttctgggtcagcctggattcagagagtataaaatggtcctct
ctagaccagaaaaagagaggaactcttgtcaaaggcatcaaatctgattgcattgctgtt
gactgggtagggagaaacctgtactggattgatggcattggaggtggtcggattattgct
gttggattaaactctctggatcagacagtcatccttgatgaggacttcgaacaacctcgc
tctctggcactcctgccacagaaggggatcatgttctggtcagagattggtaacgaggcg
aagattgagcgggcaggaatggatgggtctgagaggagagtagtggtcagtcatagcctc
agctggccaggcggtctggctgtggacacactaggggagaggatctactggacggacgag
aagctccggtgcatcggctcagccaacctggatggcggggacattgagcttctgcagatg
atggagaccaccaacccgttctctgtcacagtttacaatgacctgctctactggtcagac
accaggaggagaactattcaaagggctcataaaatcactggaaagaaccgcaaagttcta
ctcaaacgacctggacaaccttttggactgaaaatcattcatccacttctgcagacaagc
aatgagagtccctgtgagaaccttcgttgctctcacctgtgtgtgttgggcccaggcccc
aaaggggtctgcaagtgtccctctggtctgctcctagctgaggatggcctcacctgcacc
aacctggtcaactctcccttcctcttggtgctctcgccaactgttgtcacacagatctac
ctgcagaccatgcacagtgctgtgggtctgaagagctggccggagcacctcgccctacct
ctccccaatgtcaacgaggcagcgatgttggattacaccctgcaagatcagactctgtac
ctagctgactctggccaatcgtctgtagtcctcttcaagctgaaggagaccggcttggtg
cctcgcggccagttcctgcaactcaaaggggacacagttacagccctggctctagactgg
ataaccctcagcgtatactggagtagcaccaagcagccacggctgcaggtcacctcttcc
agtggggaacacactgctgtgttaattcaggatattggaagtctggagtccatagcgctt
cacccactcagtggaagactctgttttaccaacctggccaagcagggggaaggcgctcag
gtggagtgtgcttacatggatggggtgaagcgtgctccggtgtggaaggatgctcttcag
cccacctccctgactttctccaacaagggcaatgaaatctactgggctgacatcggttat
ggggtgatcggctctgtcagagttgatggtactggatacaaggagtttaagactggggat
ggcctgactgcatttgcactcagcaacggcatgctcctctgggtgacagacagtgacaca
accaaagtttggtatagagatgatccactgactaagaagctttggtttgaggtaaacact
gaaattgtcagtttgaaggcgtacagcaagtccagccagatgggctccaacctctgctca
gatgggaatggagactgcagtcacttgtgtctggctcttcctggtggtaggacctgtagg
tgtgcccatgaccattggccagtcaatgtcacacactgtgccgcagaccaccactgccca
gctggaagtagaccctgtctggacgggcacacatgcttccccctggagaagttctgtgac
ggacatcctgactgctctgacacttcagatgagaactgcgagtcttctttccattatcaa
tggaactctgtcaaggccaaagccccaacccagcttcccagtcccagctttcctatatct
gcagatcctggctccacctctctggacaacagttggctggtgagaaacctggatgcccag
cagtgtagtgaaaagcgctgcaatgggaatggggagtgtgtggagaccaatgggggcgtc
tcctgtgcctgtggtttaggctacagtggagactcctgccaagaccagctcaccaagact
atgcaaggcccactcatctatggggccgttggcctctgtgctgggattgttgttatcagt
gtcctcgctgcgttggttaagaggaagactgcaaacacaaggagagccaaccatgtggca
aagcagactagtatgactgagttggagaaaggtgaagaagctccttctacacaaccttca
cccaacagtgactttgcagaggaagtggtgtcgtctgtggattaa
DBGET
integrated database retrieval system
