Salvelinus namaycush (lake trout): 120050711
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Entry
120050711 CDS
T07522
Name
(RefSeq) neural cell adhesion molecule 2-like
KO
K06491
neural cell adhesion molecule
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120050711
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120050711
04517 IgSF CAM signaling
120050711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120050711
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120050711
04090 CD molecules [BR:
snh04090
]
120050711
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120050711
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120050711
04091 Lectins [BR:
snh04091
]
120050711
Membrane trafficking [BR:
snh04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120050711
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
NCAM1/2
120050711
CD molecules [BR:
snh04090
]
Proteins
120050711
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120050711
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Others
120050711
Lectins [BR:
snh04091
]
I-type lectins (Siglecs)
120050711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
Ig_6
Ig_PDGFR_d4
C2-set_2
Pur_ac_phosph_N
Ig_VEGFR-1-like_5th
Ig_5
Izumo-Ig
Adeno_E3_CR1
C2-set_3
C2-set
Motif
Other DBs
NCBI-GeneID:
120050711
NCBI-ProteinID:
XP_038853206
UniProt:
A0A8U0R2X1
LinkDB
All DBs
Position
Sna7:38345095..38476414
Genome browser
AA seq
825 aa
AA seq
DB search
MAVLQVSISLNKVELSVGESKFFKCTVIGEPVNLEWFNPQGESIVSSQRVALHTGEDSSR
LTIYNAEVEDAGIYRCQATDAQGQTQEATMVLEMYQKLTFRDVRSPQEFRHNEAAEVVCD
VIASPAPAVSWFYQKGFRSMEITEEHYSRFQVLPNNNLQIHKVTKADEGVYRCEARVEAR
GEINFVDIELVVNVPPVLSVLQQSFNATADYQESVTFTCITSGSPDPEVTWHRKGQQLER
SEQYVLDTMEAGRSTLTIRNIIQGDGGDYTCRATNKAGSEERELFLKVFVQPHITQLRNV
TAVEGSAAMISCVAEGEPLPEISWRRASDGQSFADGDKSQDGRVDVRGRHGKSMLTISGV
KLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNPVNISCDVKSNPPA
TMLWKRERLTISAEGTANTRIHTTVGKSLLEVTPVSDRDFGRYNCTARNNIGVKYQEFIL
AQADVPSNPYSVRLSAVSQRIATVTFMKPDSHGGVPIGHYLVNYKEVGSQAWRDVKSHGV
QTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPPAVHGQRGMGKAYR
LGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQHDFALLQPLQWNMRYEVEITARNV
KGLSEPTFYQFFMPQKPDIIDSLFSGLGLGPVVGLGLVGFLLVLVVVDVSCYFLRQCGLL
MCITRKLCSKKTATSGKSKEMEEGKAAYLGDGSKDPIVEMRTEEERITNHDGSPVHEPNE
TTPLTEPEKLPLKEENGKETLKPDMIEIKVHSDNSIHTKQDDSKA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgttctacaggtatccatatccttgaacaaggtggagctaagtgtgggagagtcc
aagttcttcaaatgcacagtgatcggagagccggtgaacctggagtggtttaacccccag
ggggagagcatcgtgtcgtcccagcgtgtggccctgcacaccggggaggacagctccagg
ctgaccatctataatgctgaggtggaggacgcgggcatctaccgctgccaggccaccgac
gcccagggacagacgcaggaggccaccatggtgctggagatgtaccagaagctgacgttc
cgtgacgtgaggtccccccaggagttccgtcacaacgaggcggcagaggtcgtgtgtgat
gtcatcgcctcgccggcacccgcagtctcttggttctaccaaaagggcttcaggagcatg
gagatcacagaggagcactacagcaggttccaggtgctgcccaacaacaacctgcagatc
cacaaggtgaccaaggcggacgagggcgtgtaccgctgtgaggcgcgagtggaggcccgc
ggcgagatcaactttgtcgacatcgagctggtggtgaatgttcctcctgtgctgtcggta
ctacagcagtcattcaatgccacagcagattaccaggagtcagtgactttcacctgcatc
acatcaggatcccccgaccccgaggtcacctggcacaggaagggccagcagttggagagg
tcagagcaatacgtcctcgacaccatggaggcaggcaggagtaccctgaccatccgcaac
atcatccagggggacgggggcgactatacctgccgagccaccaacaaggccgggtcagag
gagagggagctcttcctcaaagtgtttgtccagccacacatcacccagctgcgtaacgtg
acggcggtagagggcagcgccgccatgatctcctgcgtggctgagggggagccgctccct
gagatctcctggaggagagccagtgacggtcagagcttcgccgatggagacaagagccag
gatgggcgtgtggacgtgcggggccgccatggcaagtccatgttgaccatcagtggggtg
aagctaactgacttaggccgttttgactgtgaggccctcagcaggatcgggggccaccaa
aagagcatgttcctcgatatagagtacatgcccaagttccagaccaaccaaaccatattt
tactcgtgggaaggcaaccctgtaaacatcagctgtgacgtcaagtccaacccgcccgcc
accatgctgtggaagagagaacgcctcaccatctcagccgagggcactgccaacacacgc
atccacacgaccgtcggcaagtccctgctagaggtcaccccagtgtccgacagggatttc
ggacgctacaactgcacggcccggaacaacatcggagtgaaataccaggagttcatcttg
gcccaggcagacgtgccctcgaacccgtactcggtgcgcttgtcggccgtgtcacagcgc
atcgccacggtgacattcatgaaacccgactcacatggcggtgtacccattggccactac
ctggtcaactacaaagaagtgggctcgcaggcctggagagacgtcaagtcacatggtgtc
cagacgatagtactgctgacaggcctagagcccaacaccacctacgaagtgcgagtggct
gcagtcaatgggaagggccagggggagttcagtcacacggagtccttccagactttaccc
atacgtgagcccagccccccggcagtgcatggccagagagggatgggcaaggcctaccgg
ctgggccttgtcaagcaagacgacgggggcatgcccatcgtggagtacattgtcaagtac
aagacagacaaggaggagcagtggatgacgaagctggtgtcggggcagcatgactttgcc
ctgctgcagccgctgcagtggaacatgcgctacgaggtggagatcacagctcgcaacgtc
aagggcctttcggagcccaccttctaccagttcttcatgccccagaaacccgacatcata
gactccctattcagcggcctggggttggggcctgtggtgggcctgggcctggtcggcttc
ctcctggtactcgtggtggtggacgtcagctgctacttcctgcgccagtgcggcctgctc
atgtgtatcacgcgcaagctctgcagcaagaagacggccaccagcggcaagagcaaggag
atggaggagggcaaggccgcctacctgggcgatgggtccaaggatcctatcgttgagatg
agaacggaagaggagagaataactaaccacgatgggagcccagtgcacgaacccaacgag
actacaccgctcacagagccagagaagctaccgctgaaggaggagaacgggaaggagacg
ctcaagcccgacatgatcgagatcaaagtgcacagcgacaacagcatccacacaaagcag
gacgacagtaaagcataa
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