Salvelinus namaycush (lake trout): 120050772
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Entry
120050772 CDS
T07522
Symbol
tspeara
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120050772 (tspeara)
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120050772 (tspeara)
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120050772 (tspeara)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120050772 (tspeara)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120050772
NCBI-ProteinID:
XP_038853252
UniProt:
A0A8U0R322
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All DBs
Position
7:<48505762..48513617
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AA seq
694 aa
AA seq
DB search
HLIQSGGVRGVRLSHPHPSLDFPSSQHLVNCHLFPREFSIVTTLKVSLVAPKKNEYIFSV
VEEKEEEDARIGKRKGETQGGTDGDWYSEKDGVRGGRDDESDEERDGETDGGGERLMDGE
KRKGSRDGENSNSQGRLLIGLRFSRDGLHFLFRGRSGGVMARWVFRGIQLADDRWHTLVL
AFSGHYATLTVDCNTHLELRVHSKSLPSDLSVQGSRFHIGSRGRRNGLFSGLIRQLVLVP
GSDATPRVCPSSNPGLAELSVPAVLLDQPQKETRSDLTLPSYESEVRVSVGLEKSCSSSV
RGQLWFNPVRKALYLCDGTLWVPMLQESQRLDYVLEQQVLSTSSETYDIEVFSVQGLGLM
AAMAHRSPSLGSAVYLWRDGGFHLYQKISTHGALSWRHFTMGKKIFLVVSNSRESTGNEE
TVEKDELSVIYRWNKKTQRFVYYQALQTHCARDWEAFRIQGHTYLAVANHRQGNTNHTID
SMVYKWDRGTQLFEPHQALRTSGAYDWEAFTVGPYHFLAVANAFDGQTTHVDSVIYVWVD
GSFRLFQTIKTFCATDWEMFQIGSRVFLVVANGHQLHGNGPGRYAINSTIYELDMSSQLF
LRFQDIVTYSAVDWEFFTVGEESYLVVANSFDGESHSLNSIIYRWQGYEGFVPIHRLPTI
GCSDWEFFTSGEESYLIYSSATAPLSKVFRLKTH
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
catctgatccagtctgggggtgtgaggggtgtccgtctgtcccatcctcacccttccttg
gacttcccgtcctcccagcacctcgtcaactgtcacctcttccccagagagttctccatc
gtcaccaccctgaaggtcagcctcgtcgcccctaagaaaaacgagtacatattttctgtg
gtggaggaaaaggaagaagaggacgcaaggattggaaagaggaagggggagacacaggga
ggaactgatggagattggtacagcgagaaggatggagtacgaggagggagggatgatgag
agtgatgaagagcgggatggagagacagatggagggggagaaagactaatggacggagag
aagaggaagggaagtagagatggagagaacagcaacagtcagggacggcttctgattggc
ctgcggttctccagagacggactccacttcctgttcagaggtcgcagcgggggggtcatg
gcgcgctgggttttccgaggcatccaattggctgatgatcgctggcacacgttggtttta
gcatttagcggacactacgctactctcactgtggactgcaacacacacctggaactcagg
gttcactccaagtcgttgccctctgacctcagtgttcagggttccagattccacatcggc
agccgagggagacggaatggcctgttctcaggtctgatcagacagctggtcctggtacca
ggctctgatgccacccctcgtgtctgcccgtcttccaaccccgggctggcagagctgtct
gtgcccgcggtactgctagaccaaccacaaaaagagactaggagtgacctcacgctgcct
tcatatgagtcagaggtgcgggtgtctgtggggctggagaagtcctgttccagttcagta
agaggacagctgtggttcaaccccgtcaggaaagctctctacctctgtgacggtacactc
tgggtccccatgctgcaagagtcccagagactagactatgtcttggagcagcaggtcctc
tccaccagttcagagacgtatgatatcgaggtgttcagtgtacaagggctgggtttgatg
gcagcaatggctcaccgctccccctccctgggctctgcagtctacctctggagagatgga
ggctttcacctttaccagaagatcagcacacatggagctctctcctggagacactttact
atggggaagaagatattcctggtggtgtctaactccagggagagcacagggaatgaggag
acagtggagaaagatgaactgtcagtgatctacaggtggaataaaaagacacagaggttt
gtttattaccaggcgctccagacacactgtgcacgggactgggaggccttccgcatccaa
ggacacacctacctcgccgtggccaaccacagacaaggtaataccaaccacaccatagac
agtatggtctacaagtgggaccgtggtacgcagctgtttgaaccacaccaggccctgcgg
acctctggggcttacgactgggaggccttcacggtcggaccctaccacttcctggctgtg
gcgaacgcgttcgatggacagaccactcacgttgactcggtcatctatgtctgggtggat
ggaagtttccgcttgtttcagactattaagacattctgtgccacagattgggagatgttc
cagatcggcagcagggtcttcctggtggttgctaacggacaccaactccatggcaacggc
cccggtcgctatgccatcaactcgaccatctacgagctggacatgagctctcagctgttc
ctgcgttttcaggacatagtcacatacagtgctgttgactgggagttcttcacagtagga
gaggagagttacctggttgttgcaaactcctttgatggagagtctcactctctgaacagc
attatctacaggtggcagggatacgaggggtttgttcccattcaccggcttcccaccatc
ggatgcagcgactgggaattctttacttccggagaggagtcctatctgatctactccagc
gccacagcacctctctccaaagtcttccgtctgaaaacacactga
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