Salvelinus namaycush (lake trout): 120050781
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Entry
120050781 CDS
T07522
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120050781
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120050781
NCBI-ProteinID:
XP_038853261
UniProt:
A0A8U0UIT4
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Position
Sna7:complement(49307193..49318777)
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AA seq
822 aa
AA seq
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MVDSSEEEVDEPCFEPCTCEVKEGVLHVHCDGRGFTNASQVSQSWLRPFKLNLQRNSLRR
LYSNGFLHHSNAVAINLGNNALQDIRAGAFHGLGTLRRLYLHENKLEVFRNDTFSGLEAL
EYLQADYNVIKRIDSGALRYLHKLRVLILNDNLIPALPPHLFRSVSLTHLDLRGNRLKSL
AYAGTLEYVGRSLMELQLEENPWICGCEAVQLQIWLGHIPYTAVVGDITCEYPFHLHGKD
LREIPRKELCAGEVEGEGEKEGEREKHGGVQPPQHPPSNPKANPNPERPRPTKPSSMVHH
QNTHTSSSSTSSSAERRGRERSPRPTKRPRPSRTPPTQRSLLPNQPPPIAGYQTRPPIPI
ICPLGCTCNLHISDLGLTVNCKESGFHNVSQLTPRPLNGRKLYLSGNLIQRIYKSDFWNF
SSLDLLHLGNNRISFIQEGAFSSLPTLRSLYLNGNNLQRLSPHMFLGLLNLRYLYFEYNE
IGVVEAGAFSPMPSLQLLFLNANLLRSLPVGVFQVISLSRLNLRNNHFLSLPVEGVLEHL
TGLVQVDLQQNPWECRCDAAPLKRWLEGLSAVVVVGEVVCHSPEETTGTDLRSLSLDLLC
PDLDTHQATVENQEEWNSSTAPDGDFSLGYPVPGHGPLGPLPKTSIPLSVLVLSLLVLFV
SAFFAAAALIAYALRRRDKLPFRRQGEVDLAGIQMECGIFTEQQHHRLPVPKTPPPPLSA
LQHSLVYDSILPADPGPNPNLSPSTHMCSSPVYKNEDDSVVKQQWQQQQQFSASKEKVID
SQGPTPKVGLVDCLFGIPGMSAAVPEFRDLPDRGKPVGGESC
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggtggacagctcggaggaggaggtggatgaaccgtgcttcgagccgtgcacatgcgag
gtcaaagagggcgtgttgcacgtgcactgtgatgggcggggcttcactaacgccagccag
gtgtcccagtcctggctccgccccttcaagctcaacctgcagaggaactccttgaggcgt
ctctatagcaacggcttcctgcaccatagcaatgccgtggcgataaacctaggcaacaac
gcgctgcaggacatccgtgccggggcgtttcatggtctggggacactgagacgcctctac
ctccacgagaacaagctggaggtgttccgcaacgacaccttctctggcctggaggcactg
gagtacctgcaggccgactacaatgtcatcaaacgcatcgacagcggggcgctacgctac
ctgcataaattacgagtgctcatcctcaacgacaacctgatccctgctctgcctcctcac
ctcttcagatctgtgtctctgacccacctggacctgcgggggaaccgtctgaagagcctg
gcctacgccgggaccctggagtacgtgggccgcagcctgatggagctccagttggaggag
aacccctggatctgtggctgtgaggctgtccagctgcagatctggctgggacacatcccc
tacaccgcagtggtgggggacatcacctgcgaataccccttccacctgcacgggaaagac
ctgagggagataccacgcaaagaactgtgtgccggagaggtggagggagagggggagaag
gagggagagagggagaagcacggaggggtacagcctcctcagcatccgccctctaaccca
aaagcgaaccccaaccctgagaggcccagacccaccaagccgtcctccatggttcaccat
cagaacacacatacctcatcttcgtcgacttcatcatcggcggagcggagggggagagag
aggtcccctcggcccactaagcgtccccggccctccaggacgccccccacccagcgtagc
ctcctccccaaccagccccctcccatcgcagggtaccagactcgcccccccatccccatc
atatgtcctctagggtgcacctgtaacctccacatctcagacctagggttgacagtcaac
tgtaaggagagcggcttccataacgtctcccagctcacgccacgccccctcaacggacgg
aagctgtacctcagcggcaacctcatccagcggatctataaatcagatttctggaatttt
tccagtctggatctacttcacctgggaaacaaccggatctcctttattcaggagggagcg
ttctccagcctgccgaccctgaggagtctctacctgaacggcaacaacctgcagaggctt
agcccacacatgttcctgggtctacttaacctcaggtacctgtatttcgagtacaatgag
atcggtgtggtggaagcgggagcgttcagccccatgccgtctctccagctgctcttcctc
aacgccaacctgctgaggtcacttcctgtcggagtgttccaggtcatctccctctcccgc
ctcaacctccgcaacaaccacttcctcagcctgcctgtcgagggggtgttagagcacctc
actggactggtgcaggtggacctgcagcagaacccatgggagtgcaggtgtgatgcggcc
cctctgaagcgctggctggagggcctgagtgcggtggtggtggtgggggaggtggtctgt
cactcaccagaagagaccacaggtacagaccttcgctctctttccctggacctcctctgt
ccagacctggacacccaccaggccacggtggagaaccaggaggagtggaacagctccaca
gccccagatggtgatttctctctgggctaccctgtgccaggccatggccccctgggtccc
ctccctaagacttccatccctctgtcggtgttggtgctcagcctgctggtgctgttcgtg
tcggcgttctttgcggcagcggcgctgatcgcctatgccctgaggaggcgggacaagctg
ccgtttcggcggcagggagaggtggatctggccgggatccagatggaatgtgggattttc
accgagcagcagcaccacaggttaccggtaccgaagacccctcctcctcctctgtctgcc
ttgcagcatagcctcgtctacgatagcatcctccccgccgaccctggccctaaccctaac
ctcagtccctcaacacacatgtgcagtagcccagtctataagaatgaggatgattcagtg
gtgaagcagcaatggcaacaacagcagcagttctctgcttctaaagagaaagtcatagac
agccagggccccacccccaaggtgggattggttgactgcctctttgggatccctggaatg
tccgccgcagtcccagagttccgagacctgccggacagaggtaaacctgtgggtggcgag
agctgttag
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