Salvelinus namaycush (lake trout): 120050836
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Entry
120050836 CDS
T07522
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120050836
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
120050836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
Ig_MYOM1
V-set
VEGFR1-3_N_Ig-like
Ig_6
C2-set_2
C1-set
Ig_SEMA-3_4_7A
VEGFR-1-like_Ig-like
Transglut_i_TM
Motif
Other DBs
NCBI-GeneID:
120050836
NCBI-ProteinID:
XP_038853293
UniProt:
A0A8U0UHY4
LinkDB
All DBs
Position
7:53481670..53497698
Genome browser
AA seq
2029 aa
AA seq
DB search
MDIFGGAPRVLGYSRPVAAQCGTDTVLQCKIGGDPRPEVVWEKKNVQILSEGHYRLSEEG
QAYFLHITGVRLEDAGQYICKASNTVGETCAPATLKVEGNSQEREGVQKQTEVDQQSGEV
DQQSGEVDQQSGKVEKEKGEGSEREKKKQRYEGEPLLSDDRPHFLIKPLSLRLDRGEDAA
FSCKLSGNPLPQVVWEKDGKKLSDIFESAHFNVSSQDGGWFQLKIFRTRMPDGGVYTCRA
HNNQGGALAGAVLLVELVPERQESGASTSNGYSNGQTSPRSMRHRMGRHGLSRQPDEPNL
NSANVKKFTVSEGKHAKFRCFVTGKPKPEIIWKKDGAPLEAGRRHLLFEDREGYYTLKVM
YCKHQDTGLYVCAASNALGHTLSSVYLTVKAPAVRFRRSLQDVEVKERGMAVLECEVPNE
GIPTAWYLEDQRLQPGGKYGIEQKGTRRRLTIRDVGADDDGVYLCEMPDGGKSIAELAVK
GTIVKKLPRKLDVLEGENAVFCVEVEEENMDVHWFKDGLKLRESHQTILKSFGKTHILVF
VNVCHGDTGVVTFVVGRSKTTSRLRVKAARHSPPICPVGVEMDVDRPNSVLLSWEPAPTS
QTTTRSVYVLERQEVGSQEWLRCATSDMATSAEVMGDSVPCEGDYRFRVCCINKYGRSGH
VEFPKVVHLVPGPKIRTPLRGCEVTEGEDALFSIDLSVMVTGTWFLNSTQLQDTQHYSIQ
QAKTQHSLVIHSTKVEDHEAEVTFIANGVRDSAVLKVQAAVVKFSPMSESDSNKRVETGN
PVVLYCEVSHPSARVGWFKDGVELQVTDGLNIQSEDNMRRIVIQSAEFTDSGVYTCETMG
DVIKFNVEVEGPPVQFSEVPEEELQKSAMELDPVVLTCEVSREDANATWYKDGIEVQASD
NITIQTEGTLRRLIIRCAETSDAGTYSCQSGDNSLSFIVNIKEPPVMIVEPKEDVVMEGH
ISEQVVLQCELSRSSGEVHWFKDGLQVLEMENVQLTSEGPYRRLTVLCGSAEDSGEYVCD
TDGDSVFFQVTITELPVRIVSPTESELELTSPTSERLELSCEISQPDAQVRWYRDGLEVE
ESASLILEVQGAHRTLVIPTTTVEDTGEYVCDTEDDSVTWLVTITEPPVKLARSETMSDV
MDCFSGDPIVLEIEVSRFNAEVIWMKDGGEVEESSDVTITEDGLIRRLTIRTPAPGDSGK
YTCLASDDLIDFQVKVSEPPVKIVNRSEVKTEVKSLPSNDIELECELSRANAVAKWYKDG
RRLNEDERFCEEEEGAFRSLVILNAELEDCGDYFLDAGDDNITFHVTVQEPPVTILGNSE
DADYQEMVAGDDLILACEVSRANAPVQWYCNDRQLTSDDRTYIESYGTLRKLILSDILPS
DSGKYMCDAIDDKMVTMVKIQVPRVVEFLTELHNTMVLEGEDATFKCVVSPEDVQLVWGM
DGELVVMGARFQATQNGLCHTMVIKSCQVLDSSKITVEAEGNVSKATLKVQEAQVTFTKK
MEAVMAEEYGDATMETEVSLDTGEVQWMRQGVVIQPGPRHTLGQSGRKRSLTICNLNLSD
RGTYRCETLHDRTQVKLNVEPRKIAIRKGLAETDTFERETASFEVELSHTGVEGVWQKDG
IRVKPSNHWRVSCNGLVHGLTLSNLTLEDTGTIVFSAEGVRTSARLTVKETPVTIMKKLI
DMRLEQGSPATLECELSRQNVEVKWLKNGTELKPGKTQYRIYSMGRKRFCQLLQCSLSDA
GTYTCDVGDVNTSCNLEVYEPELEVLHGLEDLYVQEDQNAVFMCEVSMEDVTGEWYKDGH
KIRPTSTIKIRTEGTKHFLLMCSVKAEDSGEIRFVTKQTESTAYLEVEEAPVSIVKPLRD
RTALEKHRVILDCTVSTPRCELTWYRGKAELVSSDRLEIHSDGCYHKLTIHEATVEDEGT
YSIEVGEHTSTAQLLVEAQSLVIETELEDVAVTAPDQACFQCEVSVAISRPPVWTLNGET
IQSSPDVRLENHGTVHKLNLKQTRPDMSGTVTFAMGKAKSSAKLNVMWK
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctactcgcgccccgtggcggcacag
tgtggcacggacaccgtcctgcaatgcaagatcggtggcgaccctcgtcctgaggtggtc
tgggagaagaagaatgtacagatcctgtcagagggacactacaggctgtcggaggagggc
caggcctacttcctacacatcactggggtcaggctggaggacgcaggccagtatatctgc
aaggccagtaacaccgtcggtgagacgtgcgcccctgccacactgaaggtggaggggaac
agtcaggagcgggaaggggtacagaaacagacagaggtagaccaacagagcggagaggta
gaccaacagagtggagaggtagaccaacagagcggaaaggtagagaaggaaaagggagag
gggagtgagcgggagaaaaagaagcagcgctatgaaggggagcccctgctgtcagacgac
agacctcacttcctcatcaagcccctctccttgaggctggaccggggcgaggacgcagcc
ttctcctgtaagctgtcgggcaaccctctgccccaggtggtgtgggagaaggatgggaag
aagctgagcgacatcttcgagagcgcccacttcaacgtcagcagccaggacggaggctgg
ttccagctgaagatctttcggacgcggatgcccgacgggggtgtctacacctgcagagcc
cataacaatcagggaggggcgctggcgggcgcggtgctgcttgtggagctcgtcccggaa
cggcaggagagcggggcgtccacgtcaaatgggtacagcaacgggcagacatcacctcgt
agtatgaggcacaggatgggaagacacggtttgtcgagacagccagacgagcccaatctg
aactctgccaatgtgaagaaatttacggtgtcagaagggaaacatgctaagttccgctgc
ttcgtgacagggaaacctaagcctgagatcatctggaagaaagacggagcgcccctagag
gctgggaggcgtcaccttctgtttgaggacagagagggttactacacgctcaaagtgatg
tactgtaaacatcaggacacagggctgtacgtgtgtgctgcgtccaacgctctgggacac
accctcagctcagtttacctgacggtcaaagctccagcggtgcggttcaggcggtcactg
caagacgtggaggtgaaagagagaggcatggctgtgttggagtgtgaggtacctaatgag
ggcatccctactgcctggtacctggaggaccagagactgcagccaggaggtaaatacggc
atagagcagaaaggaaccaggcgcaggctcactatccgagatgtaggagcagacgacgat
ggggtctatctctgtgagatgcctgatggagggaagagtatcgctgagctggccgtcaaa
ggcacaattgttaaaaaacttcctcgaaaactagacgtgttggagggggagaacgcagtg
ttctgtgtggaggtagaggaggagaacatggatgtccactggttcaaagatggcctgaag
ctacgcgagagccaccagactatcctcaagtcctttggtaaaacccacatcctggtgttc
gtcaacgtctgccacggggacactggggtcgtgaccttcgttgtgggaagatccaagacc
acatcccggctcagagtcaaagctgccagacacagccctcccatctgtccagtgggggtg
gagatggatgtggacaggcccaacagcgtgctcctctcctgggagccggcccccaccagc
cagaccaccacgcgctccgtctatgtcctggagagacaggaagtgggatcacaggagtgg
ctgaggtgtgcgacctccgacatggcgacctccgcagaggtcatgggcgacagcgtgccg
tgcgagggcgattaccgcttccgcgtctgctgcatcaataagtatggtcgtagtggacac
gtggagttccctaaagtcgtccatcttgtgccaggtcccaagatcaggacccctctccgg
ggctgtgaggtgacggagggggaggacgccctgttctccatcgatctgtcagtgatggtg
acgggcacctggttcctgaacagcacccagctacaggatacccaacactactctatccaa
caggccaagacacagcactccctggtaatccacagcaccaaggtggaagaccacgaggca
gaggtcaccttcatcgccaacggagtcagagactcagcggttctcaaggttcaagctgcg
gtggtgaagttcagcccaatgtcagagtcagacagtaacaagagggtggagactggtaac
cctgtggtcctgtactgtgaggtgtcccacccctcagccagggtgggctggttcaaggat
ggggtggagctacaggtgacagacggcctcaacatccaatcagaagacaacatgaggagg
atcgttatccaatcggctgagttcaccgactctggcgtgtacacatgcgagacgatgggt
gatgtcatcaaattcaacgtggaggttgaaggtccccctgtgcagttcagtgaggtccct
gaggaggagctccagaagtctgccatggagctggatcctgtggttctcacctgtgaggtt
tccagagaggacgccaacgctacctggtataaggatgggattgaggtccaggccagtgat
aacatcaccatacaaacagagggcaccctgaggagactgatcatccgttgtgctgagacc
tcagacgcaggaacctacagctgtcaatcaggagacaacagcctctcattcattgtcaac
atcaaagagcctccagtgatgatcgtggagcccaaggaggacgtggttatggagggtcat
atctctgagcaggtggtgctgcagtgtgagctgtcccgctccagcggtgaggtccactgg
tttaaggacggccttcaggtcctggagatggagaacgtccagctgacgtccgagggaccg
tacaggaggctgaccgtcctctgcggctcggcagaagattccggagagtacgtctgcgac
acggatggagactctgtgttcttccaggtcaccatcacagagcttccggtgcgaatcgtc
tcccccactgagtctgagctggagctgaccagcccgacctctgagaggctggagctcagc
tgtgagatctcccagcctgatgcccaggtacggtggtaccgagacgggctggaggtggag
gagagtgcctctctcatcctggaggtccagggagcccacaggacactggtcatccccacg
accactgtggaggacacaggagagtatgtgtgtgacacagaggatgactcggtcacatgg
ctggtcactattacagagcctcctgtgaagctggcgcgctctgaaacaatgtctgacgta
atggactgtttctctggagaccccatcgtcctggagatcgaggtgtcacggttcaacgct
gaggtgatctggatgaaggatggaggagaggtggaggagagcagtgatgtcaccatcact
gaggatggactcatccgccgcctcaccatccgcacgcccgccccgggggactctgggaaa
tacacctgtcttgcctcagatgacctcatcgacttccaggtcaaggtgtcagagccccca
gtgaagatcgtgaataggtcagaagtcaagacagaggtcaagtccctgccctctaatgac
atcgagttggagtgtgaactctccagggccaatgccgtcgctaagtggtacaaagatggc
cgccggttaaacgaggacgagaggttctgtgaggaggaagaaggggcgttccgctccctg
gtgatccttaacgctgagctggaagattgcggagactacttccttgatgctggagatgac
aacatcaccttccatgtcactgtgcaagagcctccagtgaccatcctggggaactctgag
gacgcagactaccaggagatggttgccggggacgacctgatcctggcctgtgaggtgtcc
cgggccaatgcccctgtccagtggtactgtaacgacagacagctgactagcgatgaccgg
acctacatcgagagctacggcacgctgaggaaactcatcctctctgacatcctgccctcc
gactctgggaagtacatgtgtgatgctatcgatgacaagatggtcaccatggtgaagatc
caagtgccccgcgtggtagagttcttgacagagctccacaacaccatggtgttagaggga
gaggacgccaccttcaagtgcgtggtgtcgccagaggacgtgcagctggtgtgggggatg
gacggcgagctcgtcgtcatgggtgcccgtttccaggcgacgcagaacggcctgtgtcac
accatggtgatcaagagctgtcaggtcctggactcctctaagatcacagtggaggctgag
gggaacgtgtccaaggccaccctcaaagtgcaggaagctcaggtgaccttcactaagaag
atggaggcggtgatggccgaggagtacggagacgctaccatggaaacagaggtcagtctg
gacacgggcgaggtccagtggatgaggcagggtgtggtcatccagccaggaccccgacac
accctgggccagagcggacgcaaacgcagcctgaccatctgcaacctcaacctctctgac
cgcggaacctaccgctgtgaaaccctacacgaccgcacgcaggtcaaactcaacgtggag
ccccgtaagatcgccatccgtaagggtctagcggagacggacacgtttgagcgggagacg
gcctccttcgaggtggagctgtctcacactggcgtggagggcgtctggcagaaggacggc
atccgggtcaaacccagcaaccactggcgggtaagctgcaacgggctggtccacggcctc
accctgtccaaccttaccctggaggacacgggcaccatcgtcttctctgcggagggagtc
cggacctctgccaggctcactgtcaaggagactccagtgactatcatgaagaagctgata
gacatgagactggagcagggctctcctgccacattggagtgtgagctgtccagacagaac
gtggaggtcaagtggctgaagaatgggacagagctgaagccagggaagacccagtaccgt
atttactccatggggaggaagaggttctgtcagctgctgcagtgtagcctctctgatgca
ggcacctacacctgtgacgtaggagacgtcaatacatcctgtaacctggaggtctatgag
cctgaactggaggtgctacatgggctggaggacctgtatgtccaggaggaccagaatgct
gtgttcatgtgtgaggtgtccatggaggacgtgaccggggagtggtacaaggatggacac
aagatacgacccactagcaccatcaagatacgcacagaggggaccaaacacttccttctc
atgtgcagcgttaaagctgaggattctggggagatccgctttgtgaccaaacagacagaa
tcaacagcctacctagaggtggaagaggcccccgtgtctatcgtgaagcctctgagagac
cgcacggctctggagaagcaccgcgtgattctggactgcaccgtgtccacgccgcgctgt
gaactcacatggtacagaggcaaggcagagctggtgtcttctgataggctagagatccac
agtgacggctgctaccataaattgaccatccacgaggcaactgtagaggatgagggtacc
tatagtatagaggttggggagcacacctccacagcccaactcctggtggaagcccagtcc
ctggtgatagagacagagctggaggatgtggcggtgacagctcctgaccaggcctgtttc
cagtgtgaggtgtccgtggccatcagcaggcccccagtctggactctgaacggagagacc
atccagtccagccctgatgtccgcttagagaaccatggaaccgtccacaaactgaacctg
aaacagaccagaccagacatgagcgggacggttaccttcgccatgggaaaggccaagagc
agcgccaaactgaacgtgatgtggaagtag
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