Salvelinus namaycush (lake trout): 120050921
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Entry
120050921 CDS
T07522
Name
(RefSeq) T-complex protein 1 subunit epsilon-like
KO
K09497
T-complex protein 1 subunit epsilon
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120050921
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120050921
04147 Exosome [BR:
snh04147
]
120050921
Chaperones and folding catalysts [BR:
snh03110
]
Heat shock proteins
HSP60 / Chaperonin
120050921
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
BBS-CCT complex
120050921
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120050921
Exosomal proteins of colorectal cancer cells
120050921
Exosomal proteins of bladder cancer cells
120050921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF6288
Motif
Other DBs
NCBI-GeneID:
120050921
NCBI-ProteinID:
XP_038853380
UniProt:
A0A8U0R1R1
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Position
Sna7:6894658..6902025
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AA seq
541 aa
AA seq
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MSAMGQLAFDEYGRPFIIIKDQDKKTRLSGLDALKSHIMAAKAVASTLRTSLGPNGLDKM
MVDRDGEVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEA
EQLLDRGIHPIRISDGYDQAAKIAIAQLDKISETYPYDPSNTEPLIQTAMTTLGSKVINR
CHRQMAEIAVNAVLTVADMNRKDVDFELIKMEGKVGGKLEDTQLIKGVIIDKEFSHPQMP
KLLKDTKMAILTCPFEPPKPKTKHKLDVTCVEEYKALQKYEKDKFLEMIKQIKDTGANLA
ICQWGFDDEANHLLLQNELPAIRWVGGPEIELIAIATGGRIVPRFSELTAEKLGSAGVVK
EICFGTTKDRMLVIEECKNSRAVTIFIRGGNKMIIEEAKRALHDALCVIRNLVRDNRIVY
GGGASEIACALAVNQAADKCPSLEQYAMRAFADALEVIPMALAENSGLNSIQTMTEVRAR
QVTESNPALGIDCLHLNTNDMKQQHVIETLHGKKQQISLATQVVKMILKIDDIRSPGESE
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctatggggcagctcgcgttcgatgagtatggacggccgttcatcatcatcaaa
gatcaggataagaagactcggttatcgggccttgatgcactgaagtctcacatcatggca
gcaaaggcggttgcctcgacgctgaggacgtcactaggaccaaacggcctggacaagatg
atggttgacagggatggggaggtgactgtcaccaacgacggagccaccatcctcagcatg
atggatgtggaccaccagatcgccaagctcatggtggagctctccaagtctcaggacgac
gagatcggagacgggaccaccggagtcgttgtgctggctggtgctctcctggaggaggca
gaacagctgctggacaggggcatccaccccatccgtatctctgacggttacgaccaggcc
gccaagatcgccatcgcgcagctggacaagatcagcgagacttatccttacgaccccagc
aacacagagccactcatccagaccgccatgaccacgctaggttccaaagtgatcaaccgc
tgccacagacagatggcggagatcgcagtgaacgccgtcctgaccgtggcggacatgaac
cgtaaggacgtggactttgagctgatcaagatggaggggaaggtgggaggcaagctggag
gacacccagctcatcaagggagtcatcatagacaaggagttcagccaccctcagatgccc
aagctcctaaaagacacaaagatggccatcctgacctgcccgtttgagccccctaagccc
aagaccaagcacaagctggatgtgacctgtgtggaggaatacaaggccctgcagaagtat
gagaaggacaagttcctggagatgatcaaacagatcaaggatactggcgctaacctggcc
atctgccagtggggcttcgatgacgaggccaaccacctgctgctgcagaatgagctgccc
gccatccgctgggtcggaggacctgagattgagctgattgccatagcgacaggaggccgc
atcgtgccacggttctctgagctgactgctgagaagctgggttcagccggcgtagtcaag
gagatctgcttcggcaccaccaaggaccgcatgctggtcatcgaggagtgcaagaactcc
agggcagtcaccattttcatccgcggaggaaacaagatgatcattgaggaggctaaacgc
gcgctgcatgacgcgctgtgtgtcatccgtaacctggtcagggacaaccgcatagtgtac
gggggcggagcctctgagattgcctgtgccctcgccgtcaaccaggccgctgacaagtgc
ccatctctggagcagtatgccatgcgtgcatttgctgatgccctggaggtgatccccatg
gccctggcagagaacagcgggctcaactccatccagaccatgactgaggtccgtgccagg
caggtcacagagtccaacccagccctgggcatcgactgtctccacctcaacaccaacgac
atgaagcagcagcatgttattgagactcttcatgggaagaagcagcagatctctctggcc
acacaggtagtcaaaatgatcctgaagatagatgacatcagaagccctggagagtcagaa
gactag
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