Salvelinus namaycush (lake trout): 120050924
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Entry
120050924 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120050924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120050924
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120050924
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120050924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
FAM165
Motif
Other DBs
NCBI-GeneID:
120050924
NCBI-ProteinID:
XP_038853382
UniProt:
A0A8U0R1H6
LinkDB
All DBs
Position
7:7630774..7663258
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AA seq
943 aa
AA seq
DB search
MKMDIADEGDICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKH
RFAFTPIYSPDMPPRLPIQDICAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKC
LFTGSVTSLLTLPLDMLSTDNLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGPPLWLE
HHQQPQPNAAGQQPNEVTHTHTFITHTHTHIYSPSIHIAPLQAAGQGAADEPPAPANPPA
HEAEAEPPDGPPEQGEEPELDNEEEEGAAADDVDANNGAQDDMNWNALEWDRAAEELTWE
RMLGLDGSLVFLEHVFWVVSLNTLFILVFAFCPYHIGHFSVMGLGFEEYVQASQFEGLIT
TIVGYILLAMTLILCHGFAALVRFQRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLD
ICSLEMFDASLKDRELSFKSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLR
NLNDPDFNPVQEMIHLPIYRHLRRFILSVVVFGSIVLLMLWLPIRMIKLLLPAFLPYNVM
LYSDAPVSELSLELLLLQVVLPALLEQGHTRQWLKGLVRAWTVSAGYLLDLHSYLLGEQE
DNDANQPVNNNPAPGHHNNNNANPAPAVGEGLHAAHQAILQQGGPIGFQPYHRPLRFPFR
IVLLIGFMCITLLVSSLVCLTLPVFAGRWLMSFWTGSSKIHELYTAACGLYVCWLSIRGA
SVLLAWMPQGRTIIMVKVQEWSLMILKTLVVALLVAGVIPLLLGLLFELVIVAPLRVPLD
QTPLFYPWQDWALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHFIICKLAAP
VISVLLLSLCVPYAIAAGVVPAVGLSGVSGVTPEMQILIQRRIYPFLLMVVSIIGILSFQ
IRQFKRLYEHIKNDKYLVGQRLVNYERKARGASSVPPPNSTPE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacattgcagacgaaggggatatatgtcgcgtgtgtcgttcagaggggacc
ccagacaaaccgttgtaccacccctgtgtctgcactggcagcatcaagttcatccaccag
gaatgtttggtccagtggctgaagcacagcaggaaggagtactgtgaattatgcaagcac
agatttgctttcacaccaatctactccccagacatgcccccccggctgcccatccaggat
atctgtgctggcctgctgaccagtgtgggcacagccatacgatactggtttcactacaca
ctggtggccttcgcatggctgggggtggtccccctcactgcatgtcgaatctacaagtgt
ctgtttaccggctctgtgacctcgctcctgacgctgcctttggacatgctctccacagat
aacctgctggcagactgtctgcagggctgtttcgtggtgacgtgtacactgtgtgcgttc
atcagtctggtgtggctcagggagcagatagtccatggaggtccccccctgtggctggag
caccaccagcagccccagcccaatgcagccggacaacagcccaacgaggtaacacacaca
cacacgttcatcacacacacacatacacacatttacagcccctccatccacattgctccc
ctgcaggctgccggtcaaggagcagctgatgaaccccctgcccctgccaaccccccagct
cacgaggcagaggcagagcccccggacggccccccagaacagggggaggagccagaacta
gacaacgaggaagaggagggggcggctgccgacgatgtggatgccaacaacggggctcag
gatgatatgaactggaatgctctagaatgggacagagcagcagaggagctcacgtgggag
aggatgcttggactcgatggctccttggttttcttagagcatgtgttctgggttgtgtct
ctgaacactctcttcatcctggtcttcgcgttctgtccataccacattggccacttctct
gtcatgggccttggctttgaggaatatgtccaagcctcccaattcgagggcctgatcaca
accatcgtagggtacatcctgctggccatgacgctcatcctctgtcacgggttcgctgct
ctggtcaggttccagcggtcccgccgtctactaggggtctgctacatcgttgtcaaggtc
tcactgcttgttgtcgtggagataggagttttccccctcatctgtggctggtggctcgac
atctgctctttagagatgtttgatgcgtctctgaaggacagagagctgagttttaagtct
gctccaggcaccaccatgttcctgcactggctggtgggaatggtctatgtcttctatttc
gcatccttcatcctcctactgagagaggtgctgaggcctggggtcctgtggtttctgaga
aacctgaacgatccagacttcaacccagtccaggagatgatccacctacctatctacaga
cacctccgcaggttcatcctgtctgtggtggtgtttggctctattgttctcctgatgttg
tggctgcccatcaggatgatcaagctcctcctccctgccttcctgccctacaacgtcatg
ctttacagtgatgctccagtcagtgagttgtctctggagctgttgctactgcaggtggtt
ctgccagctctcctggaacaaggtcacacacgccagtggctcaaaggtctggtcagggcc
tggaccgtcagcgctggatacctattagacctccactcttacctgctcggagaacaggaa
gacaatgatgctaaccagcctgtcaacaacaaccctgctcccggtcaccataacaacaac
aacgctaaccccgcccctgctgtgggggaggggcttcatgcagcccatcaggccatacta
cagcagggaggacctataggtttccaaccctaccaccggcccctacgcttccctttcagg
atcgtcttgctgatagggttcatgtgtatcaccctgctggtttccagtctggtgtgtctg
acgttaccagtgtttgcgggccgttggctgatgtcattctggacaggcagctcgaagatc
catgagctgtatacagcagcgtgtggtctgtacgtgtgctggctgtccatccgcggtgcc
agcgtgctgttggcctggatgccccagggacgcaccatcatcatggtcaaagtccaggag
tggagcctcatgattctgaagaccctggtagtagcgttgctggtggctggtgttatccct
ctactgctgggcctgctgtttgaactggtcatcgttgctcccctacgcgttcctctggac
cagacgcctctcttctacccctggcaggactgggctctgggggtgctccatgccaaaatc
atcgctgccatcaccctcatgggtccacagtggtggctgaagactgtcatagagcaggtg
tacgctaacggcatcaggaacatcgacctccatttcatcatctgtaagctggctgcccct
gtcatctcggtgctgctgctgtccctgtgtgtcccctacgccatagcagccggggtcgta
cctgccgtaggtctgtcaggtgtgtcaggtgtgactccagagatgcagattctgatacag
aggaggatctacccattcctcctgatggtggtgtccatcatcggcatcctctccttccag
atacgacagttcaaacgtctttacgaacacatcaagaacgacaagtacctggttggccag
cggcttgtcaactacgaacgcaaggctaggggagccagctctgtcccgccccctaactct
accccagagtag
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