Salvelinus namaycush (lake trout): 120050933
Help
Entry
120050933 CDS
T07522
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120050933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120050933
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120050933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
YcaO_C
PSY3
Nup49_C
FapA
Tox-ODYAM1
Motif
Other DBs
NCBI-GeneID:
120050933
NCBI-ProteinID:
XP_038853399
UniProt:
A0A8U0R4L2
LinkDB
All DBs
Position
7:complement(8463304..8484380)
Genome browser
AA seq
572 aa
AA seq
DB search
MSGFNFGSGTTNTGGGFSFGGTASTPAAAGMGGFTLGGLGGAASTTTTSSLGLGGSLFAQ
KPTGGFSFNTPASGAPAASTAPTTGFSMAFNKPSASAQPFSLTAASSAPSGAGLTLGSFL
TSTAPQQGATGFALNLGGVATSTAPSTGLSLGSSMFSNMTPTGLAQTTLGSGGLTLGSLV
STSTAISAAPSLGLGGVDFSTSSEKKSDKSLGASPQDSKALKDENLPPVICQDVDHFQKF
VKEQKQFHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGLQRNALAIGHLKMEAALELKN
ADIALQTQKTPSGLQHENTAPYDYFRCLVDQFEVQLQQYRQQIEELENHLSTQGSGSHIT
PQDLSLAMQKLYQTFVCLAAQLQSVHENVKILKQQYLGYRRAFLEDSTDVFESKRAASKK
WKSAPRITIGPAPFGSVPNAAAVAMAATLSQQQPGPGRQAPLGSGLGNPFASGVGSSMGS
SGLGVFGGGPGFGGVATGGSFGFSSASKASGGSLSAGFGSSSSSGFNFSNPGLNASAGLT
FGVSNPTATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttttaatttcggatctggaaccacgaacactggcggggggttttcgtttgga
ggcactgccagtaccccagctgcagcaggtatgggtggctttactctgggtggtttgggt
ggtgcagcctccaccaccaccacctcttctctgggcctgggggggtccctgttcgcacag
aaacctactggggggttctcctttaacactcctgcctcaggtgccccagcagcctctaca
gcccctaccacgggctttagtatggccttcaataaaccttctgcctcggcccaaccattc
tccctcactgctgcctcctcggccccctcaggggcaggactgacgctaggctccttcctc
acctccaccgctccacaacaaggagccacaggatttgctctcaacctagggggtgtggcc
acgagtacagccccgtccacaggtctatcgttgggttccagtatgttctctaacatgact
cctactggtttagcccagaccactcttggttcaggggggttgacgttaggttccctagtc
tctacctcgaccgcgatctcagcggcccctagccttggactgggcggagttgacttcagc
acttcctcagagaaaaagagcgacaaatcattaggggccagcccacaggacagtaaagcg
ttgaaagatgaaaacttgcctccagtcatctgtcaggatgtagaccatttccagaagttt
gtgaaggagcagaagcagtttcacgaggagatcagccggatgtcatctaaagccatgctg
aaggttcaggatgacatcaagagtctcaaacagctgctgtctgtcagcgcctcaggacta
cagagaaacgccctggctataggtcacctgaagatggaggctgcgctggagttgaagaat
gcagacatagctctacagactcagaagaccccctctggactccaacatgaaaatacagct
ccctatgattatttccggtgtttagtggatcagtttgaggtccagctgcagcagtacaga
cagcagatagaggagctggagaatcacctctctacacagggcagtggatcacacatcaca
ccacaggatctgtctctggccatgcagaagttgtaccagacgtttgtttgtctggctgct
cagctccagtcagtacacgagaacgtcaagatcctgaagcagcagtacctgggataccgc
cgggccttcctggaggactccactgatgttttcgagtccaagcgggcggccagtaagaag
tggaagagcgccccacgcatcacaatcggtcccgccccgttcggcagtgtccctaacgca
gcagcggtcgccatggcagccacgctgagccagcagcagcccggcccagggagacaggcg
cccctggggtctggcttgggaaacccctttgcctcaggagtgggctctagcatgggctca
tcaggccttggagtatttggtgggggtccaggtttcgggggggttgcgacggggggctca
tttggtttctcctccgccagcaaggcctcgggagggagcctgagcgcaggttttggtagc
agcagtagttcggggtttaacttcagtaaccccgggctcaacgcgtctgccggcctgacg
tttggcgtgtccaaccctaccgccacgggcttcggcacgggaggtccactgctacagctc
aagaagcccccggtgggaaacaagagaggcaagagatag
DBGET
integrated database retrieval system
