Salvelinus namaycush (lake trout): 120050990
Help
Entry
120050990 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120050990
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120050990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120050990
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120050990
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120050990
Multi subunit type E3
LUBAC complex
120050990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
UBA
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
120050990
NCBI-ProteinID:
XP_038853479
UniProt:
A0A8U0UH39
LinkDB
All DBs
Position
Sna7:13383069..13400717
Genome browser
AA seq
1143 aa
AA seq
DB search
MMSTQSVPFEEVRRRAESLLSSSGSAQVVKDDVQFMANIPLSLSDKFHHITAQTMVTENI
TGHRRQEVLESLGRLFKALSILEKYGCNLTSPSRPRYWRSVKHNNPVFRTTVDEIKGGKS
VLFLYGYTNQQPDGLSFPDDVTHPDVEKVAAVTIEVMILRMEMDMLIKGTHAHPEMYSNI
IPSPNLQKITQDEPEMMSDAVVIPPGEERGDRGKDLQPLSPPPKHATCPGLSHVPTTPTD
GMCDLCGATPALLCPACGSLPFCQSCDLLYHLHPSRANHRRDRIQETCILCGVSQVSAHC
STCSQRLCLECDRLYHSHPDRGGHNRTVVSHAKPKRALSHSLSLWECAQCTTVNEVKAVL
CVTCERPRLALASLIVQEDPGQPPSSTEWQCKSCTVVNQGSSILCEVCERPRLATRPSIT
PVLPSTPVLLSTPVLPSTPVLLSTPVLSTPGPTSDNETEWMCQFCTYVNAQPVVVCEMCN
LPCKDPAVTSLKSLPLQSPIKDLASPSSTPQLRPQIPPRVNIHIKRQNLMRDEGLKLVHQ
LREGEKNGVGPEEVYAALCVSGGSNVNPCDWLKSELPHLLDEICAMAASAALQNYKAEVS
GPQDTTERDGGSTEQQSPSVLLCEGVRLSRVEAKQAWLAAGGDTERAVRQLLRDRQVKMR
ELRSLGFREASQCEEALRLSGGEVQGALSVLQRPLLEPFHQRIWSDQPEAPIDAKSPDKQ
RMCRRLLALYELPSWGRCELALSLLQEPDAQYSLEDVIQAVKESQDREFLRRLLNNECPC
CLSIFPHSKMQSLTSCQCSVCHECFTQHFTIAVRDKHIRDMVCPVCAGPDINDPEHLDSY
FSTLDIQLRDCLDREVYELFHKKLMEHALMKDPMFLWCCHCTFGFIYDGNQFKVTCPTCM
KSFCNQCKKPWEAQHQDVSCEQFQLWKRENDPDYQRQGLAGFLRDNGITCPHCRFQYALT
KGGCMHFSCSQCRYQFCSGCNNPFHTTACKTIQCKITGLHAHHPRDCLFYLRDWEPVRLQ
ALLQRNAVVFNTDPPNGTQTDACGVMEQKDEGGQQIDSPCGVQTQPEEAGLCDKHYREYL
VSLINGHTLDPALLYDQQEVTVACRRYQVEEQQGEGEDDRVYQDRLLKKLMEVPLGEKVP
RMR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtacccagtctgtcccatttgaggaggtgcggaggagagcggagtccctccta
tcctcctcaggctctgcccaggtggtaaaggatgatgtccagttcatggccaacatcccc
ctgtccctgtctgacaagtttcaccacatcacagcgcagaccatggtgacagagaacatc
acagggcacagaaggcaggaggtcctagagtctttgggtcggctgtttaaagccttgagt
atcctggagaagtatggctgtaacctgaccagccccagcaggcccaggtactggcggagc
gtcaaacacaacaacccagttttcaggactaccgtggacgaaatcaagggtggcaagtca
gtcctatttctttatggttacaccaatcagcagccagacgggctcagcttccctgatgat
gtcacacatccagacgttgagaaggttgctgcggtgaccattgaggtcatgatcctgcgc
atggaaatggacatgctcatcaagggtacacatgctcacccagaaatgtacagcaatatc
atcccatcccctaatctacagaagataacccaggatgaaccagagatgatgtctgatgcg
gtggtcattccaccaggagaggagcgcggggacagggggaaagaccttcagccgctatct
cctccacccaaacatgctacctgtcctggactaagtcatgtccccaccactcctactgat
gggatgtgtgatttgtgcggtgccactcccgctctcctctgcccggcctgtggttctctt
cctttctgtcagtcatgtgacctcctctaccacctccacccgtccagagccaatcacagg
agagatagaatacaggagacctgtatcctctgtggtgtgtcccaagtctctgcccattgc
tccacctgttctcagaggctgtgtctggagtgtgacagactgtaccattctcaccctgac
cgcgggggtcacaacaggacagtggtttcccatgccaaaccaaaaagagctttaagccac
tctctttccttgtgggagtgtgctcagtgcactacagtcaacgaggtgaaggccgtgctc
tgtgtgacctgtgaacgaccccgacttgccctcgcttcccttatagttcaggaggacccg
gggcaaccgccatccagcacagagtggcagtgtaagagctgtactgtcgtgaaccagggc
agcagtatactgtgtgaggtgtgtgagcgcccccgtctggccacccgtccctctatcacg
ccagtactccccagtactccagtactcctcagtactccagtactccccagtactccagta
ctcctcagtactccggtactctccacgccaggacccacgtcagataacgaaacagagtgg
atgtgtcagttctgcacctatgtgaacgctcagcctgtagtggtttgtgagatgtgcaac
ttgccgtgtaaagatcctgcagtcaccagcctcaagtccctccccctgcagtctccaatc
aaagacttagcctcaccttcttctacgccccaactccgtccccagatccctcccagggtg
aacatccacatcaagagacagaacctgatgagggatgaagggctgaaactcgtccatcaa
ttacgagagggagagaaaaatggagtgggcccagaggaggtctacgcagccctttgcgtt
tctgggggaagcaacgtcaacccctgcgattggctgaaatcagagctgccccaccttctg
gatgagatctgtgccatggcggcttcagctgctttgcagaactacaaagcagaggtttct
gggccgcaggataccaccgagcgggatggaggttcgacagagcagcagagtcccagtgtg
ctgctgtgtgagggggtgcggctgtccagggttgaggccaagcaggcatggctggcagca
ggaggcgacactgagagagcagtccgtcagctgctcagagacagacaggtcaagatgcgc
gagctgcgttctctgggtttccgggaggcgtcccagtgtgaggaggctctgcgtctgagt
ggaggagaggtgcagggggctctgtccgtgctgcagcggcccctcctggagcccttccac
cagcgcatctggagcgaccagccagaggcccctatcgatgccaagagccccgacaaacag
cggatgtgcaggcgcctgctggcgttgtacgagctgcccagctgggggcgctgtgagctg
gccctgtctctactccaggagcctgatgcccagtactccctggaggacgtcatccaggcc
gtcaaagagtcccaggacagggagttcctccgccgcctccttaacaacgagtgcccctgc
tgcctcagcatcttcccccacagcaagatgcagtccctgacctcgtgtcagtgctcggtg
tgccacgagtgtttcacgcagcacttcaccatcgctgtaagagacaaacacatcagagac
atggtgtgtcccgtgtgtgcaggaccagacatcaacgaccccgagcacctggacagctac
ttctctaccctggacatccagctgcgagactgtctggatcgtgaggtgtacgagctcttc
cacaagaagctgatggagcatgctctgatgaaagaccccatgttcctgtggtgttgtcac
tgcacctttgggtttatctatgatggaaaccagttcaaagtcacctgtcccacgtgtatg
aagagcttttgcaaccaatgcaaaaagccttgggaagctcagcaccaggatgtatcctgt
gagcagttccagttatggaagagagagaatgaccctgactaccagagacaggggctggcc
gggttcctgcgggacaatggcatcacctgtcctcactgcaggttccagtatgccttgacc
aaagggggctgcatgcacttcagctgctcccaatgcagataccagttctgcagcggctgc
aacaatcccttccacactacggcgtgtaagacaatccagtgtaaaatcacaggtctccat
gctcatcacccacgagactgtctcttctacctcagggactgggagcctgtcagactacag
gccctgctgcagaggaatgctgttgtgttcaacacagacccccctaatgggacacagact
gacgcatgtggagtgatggagcagaaggatgagggaggtcagcagattgactcaccctgt
ggagtccaaactcagccagaagaagctggactctgcgataaacactacagagagtacctg
gttagtctcattaacggacacaccctggaccccgctcttctctatgaccaacaagaggtg
acagttgcctgcaggaggtaccaggtggaggagcaacaaggggagggggaggacgaccgg
gtgtaccaggatcgactgctgaagaaactgatggaagttccacttggagaaaaggttcct
cggatgagatga
DBGET
integrated database retrieval system
