KEGG   Salvelinus namaycush (lake trout): 120051093
Entry
120051093         CDS       T07522                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:snh03009]
    120051093 (nle1)
Ribosome biogenesis [BR:snh03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    120051093 (nle1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NLE Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_HPS5 eIF2A WD40_RFWD3 Beta-prop_SPT8 Ge1_WD40 PD40 RMC1_N PALB2_WD40 Beta-prop_NWD2_C Beta-prop_RIG_1st WDR54 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Cytochrom_D1 Tenui_PVC2
Other DBs
NCBI-GeneID: 120051093
NCBI-ProteinID: XP_038853673
UniProt: A0A8U0R2G7
LinkDB
Position
Sna7:21819219..21840633
AA seq 477 aa
MSSDVERLLIQFQDEAGEPLGSPFDVPLDITPDKLQLVCNALLQKEEPVPLAFFVRGEAE
VLESLRVCVKALGAETETVLPVVYQPQAVFRVRAVARCTSSLQGHTEAVISAAFSPTGKY
LASGSGDTTVRFWDLTTETPQHTSRGHSHWVLTISWSPDGRKLASGCKNSQICIWDPVTG
QQMGKTLAGHTKWITWISWEPLHLNPECRYLASSSKDGAVRVWDVVLGRCERILTGHTQS
VTCVKWGGDGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEP
ADATINPQDQTGTFEELKEKALQRYNKVRGEAPERLVSGSDDFTLFLWNPAEDKKPLARL
TGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLQSLRGHVGAVYQVAWSADSRL
MVSGSSDSTLKVWDIKTGKLHTDLPGHADEVFAVDWSPDGQRVVSGGKDKCLRIWRR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtccagtgacgtggaacggctgttgatccagtttcaggatgaagcgggggagccgctg
ggttctccctttgatgtcccgctggacatcacacctgacaagctacagctggtctgcaat
gcactgctacagaaggaggagccggtaccattggcgttctttgtgcgtggcgaggcggag
gtgttagagagcctgagggtgtgtgtgaaggccttgggggcggagactgagacggttctg
cccgtagtgtaccaaccccaggcggtgttcagggtcagggctgttgctcgctgtacctcc
tcactacagggacacacagaggctgtcatctccgctgcattcagccctactgggaagtac
ctggccagtggttctggagacactacagtgaggttctgggacctgaccactgagacacca
caacatacctccagaggccactcccactgggtgctgactatttcctggtcacctgacgga
aggaagctggcctctggctgcaagaacagccagatctgtatatgggacccagtgacagga
cagcagatggggaagaccctggcaggacacaccaagtggatcacatggatctcctgggaa
cctctacaccttaacccagagtgccgttacctggctagcagcagtaaggacggggcggtg
agggtttgggacgttgtgttgggtcgctgtgagaggatcctgacggggcacacccagtct
gttacctgtgtgaagtggggaggagacggactgctatacacatcatcacaggacaggacc
attaaagtctggagggctaaagacggggtccagtgcaggactcttcaaggccatgctcac
tgggtcaacaccctggctctcagtactgactatgtgctacggaccggcgcctttgaaccc
gctgacgctaccatcaacccccaggaccagactggcacatttgaggagctcaaagagaaa
gccttgcagagatacaacaaagtcaggggtgaggccccggagcgtcttgtgtcgggctct
gatgacttcaccttgttcctctggaacccagcagaggataaaaagcctctggcgagactg
acgggtcacagcgctctggtcaacgaggtcttgttctcccccgacacacgcctccttgcc
tctgcttccttcgacaagtccatcaagatctgggacggacgcaccggaaagtacctacag
tccctgcgtggtcatgtaggagcagtgtaccaggtggcgtggtcagcagacagtagactg
atggtcagtgggtccagtgactccactctgaaggtctgggacatcaagactggcaaacta
cacactgatctacctggacacgcagatgaggtgtttgcagtggactggagtcctgatggc
cagagagtagtcagtggaggaaaagacaagtgtctcagaatatggaggaggtag

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