Salvelinus namaycush (lake trout): 120051093
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Entry
120051093 CDS
T07522
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120051093 (nle1)
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120051093 (nle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NLE
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_HPS5
eIF2A
WD40_RFWD3
Beta-prop_SPT8
Ge1_WD40
PD40
RMC1_N
PALB2_WD40
Beta-prop_NWD2_C
Beta-prop_RIG_1st
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Cytochrom_D1
Tenui_PVC2
Motif
Other DBs
NCBI-GeneID:
120051093
NCBI-ProteinID:
XP_038853673
UniProt:
A0A8U0R2G7
LinkDB
All DBs
Position
Sna7:21819219..21840633
Genome browser
AA seq
477 aa
AA seq
DB search
MSSDVERLLIQFQDEAGEPLGSPFDVPLDITPDKLQLVCNALLQKEEPVPLAFFVRGEAE
VLESLRVCVKALGAETETVLPVVYQPQAVFRVRAVARCTSSLQGHTEAVISAAFSPTGKY
LASGSGDTTVRFWDLTTETPQHTSRGHSHWVLTISWSPDGRKLASGCKNSQICIWDPVTG
QQMGKTLAGHTKWITWISWEPLHLNPECRYLASSSKDGAVRVWDVVLGRCERILTGHTQS
VTCVKWGGDGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEP
ADATINPQDQTGTFEELKEKALQRYNKVRGEAPERLVSGSDDFTLFLWNPAEDKKPLARL
TGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLQSLRGHVGAVYQVAWSADSRL
MVSGSSDSTLKVWDIKTGKLHTDLPGHADEVFAVDWSPDGQRVVSGGKDKCLRIWRR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgacgtggaacggctgttgatccagtttcaggatgaagcgggggagccgctg
ggttctccctttgatgtcccgctggacatcacacctgacaagctacagctggtctgcaat
gcactgctacagaaggaggagccggtaccattggcgttctttgtgcgtggcgaggcggag
gtgttagagagcctgagggtgtgtgtgaaggccttgggggcggagactgagacggttctg
cccgtagtgtaccaaccccaggcggtgttcagggtcagggctgttgctcgctgtacctcc
tcactacagggacacacagaggctgtcatctccgctgcattcagccctactgggaagtac
ctggccagtggttctggagacactacagtgaggttctgggacctgaccactgagacacca
caacatacctccagaggccactcccactgggtgctgactatttcctggtcacctgacgga
aggaagctggcctctggctgcaagaacagccagatctgtatatgggacccagtgacagga
cagcagatggggaagaccctggcaggacacaccaagtggatcacatggatctcctgggaa
cctctacaccttaacccagagtgccgttacctggctagcagcagtaaggacggggcggtg
agggtttgggacgttgtgttgggtcgctgtgagaggatcctgacggggcacacccagtct
gttacctgtgtgaagtggggaggagacggactgctatacacatcatcacaggacaggacc
attaaagtctggagggctaaagacggggtccagtgcaggactcttcaaggccatgctcac
tgggtcaacaccctggctctcagtactgactatgtgctacggaccggcgcctttgaaccc
gctgacgctaccatcaacccccaggaccagactggcacatttgaggagctcaaagagaaa
gccttgcagagatacaacaaagtcaggggtgaggccccggagcgtcttgtgtcgggctct
gatgacttcaccttgttcctctggaacccagcagaggataaaaagcctctggcgagactg
acgggtcacagcgctctggtcaacgaggtcttgttctcccccgacacacgcctccttgcc
tctgcttccttcgacaagtccatcaagatctgggacggacgcaccggaaagtacctacag
tccctgcgtggtcatgtaggagcagtgtaccaggtggcgtggtcagcagacagtagactg
atggtcagtgggtccagtgactccactctgaaggtctgggacatcaagactggcaaacta
cacactgatctacctggacacgcagatgaggtgtttgcagtggactggagtcctgatggc
cagagagtagtcagtggaggaaaagacaagtgtctcagaatatggaggaggtag
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integrated database retrieval system