Salvelinus namaycush (lake trout): 120051118
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Entry
120051118 CDS
T07522
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog
KO
K06788
coxsackievirus and adenovirus receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03267
Virion - Adenovirus
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
120051118
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120051118
04517 IgSF CAM signaling
120051118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120051118
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
CTX family
120051118
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
I-set
Ig_3
ig
DUF5641
Ig_2
Ig_C17orf99
TM_ErbB1
Tweety
Sp38
EphA2_TM
PDGLE
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120051118
NCBI-ProteinID:
XP_038853722
UniProt:
A0A8U0R1V8
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Position
1:24351252..24391449
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AA seq
387 aa
AA seq
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MQERNKWNKTKRNFSPGDLMVIVDDTAPMNSWLMGRVVEALPGAKDVIEGIKITSTGPQT
IQKAQGETVMLGCTFIFDPSDIGELDIEWLHVRPDMTQKDQLILSYSGGKKLHYGDPSLS
TRMDFTGDPALGDASISISAVKDSDTATYQCKVKKVPGVDMRKVTLAVKVPPSMPKCWVE
GGEEKGSDVSLQCKSSVGSIPVNYVWTRESGGAIPPTATQNSQTGELMIRNHSESYMGNY
LCVVSNPVGKAQCKYTLNAYNPSNKAGTIVGAVIGGLLLLLLLLLLIWLLVCCCHKRRYE
KEVAHEIREDAPAPESRPASRNSSFRSVLGCRSHPGVVYSSVRKGQPKRTESGHSSIYTD
RSKGTPAPSGQQAPPLLKYDSSYGYPV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcggaacaagtggaacaaaactaagagaaacttcagtcctggtgaccttatg
gtcatcgtcgatgacaccgcgccaatgaactcttggctaatggggcgtgtggtggaggct
ttgccaggggccaaagatgtcatagagggtattaagataacatccacagggcctcagacc
attcagaaagcccagggggagacagtcatgctggggtgcaccttcatctttgacccctct
gacataggagaactggacattgagtggttgcacgtccgtccagacatgacccagaaagac
cagctgatcttatcttattcaggagggaaaaaattgcattatggggaccccagcttgtct
accaggatggacttcacaggagaccccgcactgggagacgcatccatctccatctctgca
gtgaaggactcagacacagccacctaccagtgcaaagtcaagaaagtgccgggtgtcgac
atgcgaaaagtcactctggcagtgaaggtccctccatcaatgcctaagtgctgggttgaa
ggtggcgaggagaaggggagcgatgtctccctccaatgcaaatcctccgtgggatccatc
cccgtcaactatgtctggaccagagagagtggaggggccatcccgcccacagcaacacaa
aactctcagactggagagctgatgataagaaatcactcagagagctacatgggaaactat
ctttgtgtggtgtcgaatcctgttggcaaagcgcagtgtaaatataccctgaacgcatac
aacccttccaacaaggcagggaccatagtgggtgctgtaattggtggcctgctactgttg
ctcctcctcctgcttctcatctggcttctggtctgctgctgccacaagcgtcgctatgag
aaggaggttgcccatgaaatcagggaggatgccccagccccagagagtcgccccgccagc
aggaactccagcttccgctcggtcctaggctgccgctcccaccccggggtggtctacagc
tccgtaagaaagggccagcccaagaggacagaatcaggccacagcagcatctacacagac
aggagcaaaggcacgcccgcacccagtgggcagcaggcccctcctctgttgaaatatgac
agcagttatggctaccctgtgtaa
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