Salvelinus namaycush (lake trout): 120051137
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Entry
120051137 CDS
T07522
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120051137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120051137
03036 Chromosome and associated proteins [BR:
snh03036
]
120051137
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120051137
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120051137
PBAF complex
120051137
GBAF(ncBAF) complex
120051137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
120051137
NCBI-ProteinID:
XP_038853760
UniProt:
A0A8U0UI58
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Position
Sna7:complement(25014644..25044293)
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AA seq
506 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPAVRPGL
PAPVMEPSRKRPAPSQQVQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQE
AVSRYFYSKIQQRRQELEQALVVRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacggcagggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccgtctggagcgaggatgccccaccagggt
gctcccatgggcccccccggacccccgttcggtgggagccccgcggtgcggcccggcctg
cccgccccggtcatggagcccagccgcaagagacctgccccctcccagcaggtccagcag
cagcagaacgtccagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtcccg
gagtcccaggcttacatggacctgttggcctttgaacgtaaactggaccagaccattatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcctgacgctgacgactcagacggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctcgttcttcaagagcctggtgatcgagctagacaaagacctgtat
ggtcctgacaaccacctggtagagtggcaccgcactcccaccacccaggagactgacggc
ttccaggtgaagaggccaggggacgtgagcgtgcgctgcacactgctgctaatgctagac
taccagcccccccagttcaagctggaccctcgtcttgctcgcctgctgggtatccacacc
cagacccgctcctgtatcatccaggccctgtggcagtatgtcaagaccaacaagttgcag
gactcccacgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgc
ccgcggctcaagttctcggagatcccccagcgtctcaccaacctcctcctgccccctgac
cccatcgtcatcaaccacgtcatcagcgtggaccctaatgaccagaagaagacagcgtgc
tatgacatcgacgtggaggtggaggaccccctgaagggccagatgagcagcttcctgctc
tccactgccaaccagcaggagatcgcctcactggacaacaagatccacgaaaccattgag
tccatcaaccagttaaagatccagagggactttatgctcagcttctccagggatcctaag
ggctacatccaggactggctaaagtcccagagcagagacctgaagctgatgacggacgtg
gtggggaacccggaggaggagaggagggcggagttttaccacgagccctggtcccaggag
gccgtcagtcgttacttctacagcaagatccagcagaggagacaggagttggagcaggcc
ttggttgtgaggaacacctaa
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