Salvelinus namaycush (lake trout): 120051138
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Entry
120051138 CDS
T07522
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120051138
04121 Ubiquitin system [BR:
snh04121
]
120051138
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120051138
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
120051138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
120051138
NCBI-ProteinID:
XP_038853763
UniProt:
A0A8U0R2M2
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Position
Sna7:complement(25063289..25096481)
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AA seq
1117 aa
AA seq
DB search
MAEGSVTDSLDLNPDETSSQQKCNQQQSRRGRNREGHNRNWSGCNNYGPAPQQQQQGHFH
HGVKQSHVHDNSTIPVNFHPPPYHQEDVSRGRGRGGGRANGDGGGRGSRGQPPRWNRPGV
DTGPPGLPRGHHGLGGYRPGTPPIDRPSWRRGDPGGRSVEVGPAHEDHQDTRPEKPRRFS
QEPRRKERGARSAKGPPHSLENQDSHATGGGGWDPAEPREETPPSEMGARSRKGGRAEER
NPHVDAQQKFPEPKRRQGPIKEYPQEKDHERGARDTPSGHRDKLGSGTEEEPSWRSQGRG
QGRRTPLQDRGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYECMVCCEVI
RVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNVYKCFCG
KATNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTKACICGRTSQ
PMRCGQGTAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVSREVLCGT
DKDRFDGSGHFCCQKACGKMLDCETHRCEQVCHPGPCKPCPRSPRLVRSCPCGQTALAKL
LELGYPERRGCSDPIPSCGKTCSKPLPCGSSEIIHICEKLCHEGSCGPCSLTSTIKCKCG
SKTKDVPCAAIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGAEHKCSLICGYKLNCGL
HRCQELCHRGNCQPCWQTSFDELACHCGLSVLFPPIACGTKPPECKNPCTRRHECDHPVF
HNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCDLHRCRRICHR
AECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPCNTCTAKVALQCDCGRRKETVVCTE
AASAHQRYAAIAMASKLSDMQLGDSVDMGLITKKEMKHTKLECDEGCAALERNRRLAEAL
QIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEVEEEIKNLVELTSKGKQSKRSHCFP
PMNREHRKLVHELAEAYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLMERDTGVPR
APPPIAHIKHSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgagacttcatcacaa
cagaaatgtaaccagcagcaatccaggaggggtcggaacagagagggccacaaccgtaac
tggagtggttgtaataattacggcccagcaccgcagcaacagcagcaaggccattttcac
cacggtgtcaaacaatctcatgtccatgacaattcaacgatccctgtaaatttccatcct
cctccctaccaccaagaggatgtatcaaggggccgaggaagaggaggaggaagagctaac
ggagatggagggggccggggctcaaggggccagcctccaaggtggaacaggcctggggtt
gacactggcccccctggcttacccaggggccaccatggactgggtggctacaggcctgga
acaccccccatagacaggcctagctggcgtcgaggagaccctggcggccggagcgtagag
gtggggcctgcccacgaagaccaccaggacacccgccctgaaaagccccgacggttcagc
caggagccgcggcgaaaagagagaggggcgaggagcgcgaaaggacctcctcactctctg
gagaaccaggacagccacgctacaggaggaggaggctgggaccctgctgagcccagagaa
gaaaccccaccatcagaaatgggggccaggagccggaaaggagggagagccgaggaaagg
aacccccacgtcgacgctcaacagaaattccctgagcccaagcgacgccaggggcctatc
aaagaatatccccaggagaaggaccatgagaggggagccagagacaccccctctggccat
cgtgacaaactgggctccggcactgaagaggagcccagctggaggagtcaggggagaggc
caggggagacgcacccccctacaggacagaggccagaggagaacactcaactcagaccac
aggcctggacagaagaggtgggacaacgtgcccaacaagagcaaggagactcagacaggt
tgcctgatcgagcagctgtctgaggagaagtatgagtgcatggtgtgctgtgaggtgatc
agagtcatggctccagtctggagctgccacagctgcttccacgtgttccatctcaactgc
atcaagaagtgggcccgctccccagcctcccaggcagacgaaacaaatgacgggtggcgc
tgtccggcctgtcagaatgttgtcttccaacccccgaacgtctacaagtgcttctgtggc
aaagcgaccaacccagagttccagcgtagtgagatcccacacagctgtggagacatgtgt
gggaagaagaggagcggagcagactgcaagcatccctgtaacattttgtgtcaccccgga
ccttgtccccagtgtcctgcttctgtcaccaaagcatgcatctgtggaagaaccagtcag
ccaatgcggtgtggccagggcactgccatccactgtgacaagcagtgtggcgccaccctc
aactgttcggaacacacctgtacccaggtgtgccacagcggactgtgccagccttgcccg
ctacaggtcaagcaggtgtgctactgcggtgttgtgtctcgggaggtactctgtgggacg
gataaagaccgctttgacggctcaggacacttctgctgtcagaaagcatgtggcaagatg
ttggactgtgagacccaccgctgtgagcaggtgtgccaccctgggccgtgcaagccgtgc
ccacgctcccccaggctagtgaggagctgcccctgtgggcagacggccctggccaagctc
ctggagctgggctaccccgaacgccgcggctgctccgaccccatcccctcctgtggcaag
acctgcagcaagcctctgccctgcggctccagcgagatcatccacatctgtgagaagctg
tgccatgagggaagttgtggtccctgctcgctcacctccaccatcaaatgcaaatgcggc
tctaagaccaaggatgttccctgtgcagccatccagaatgaagatggactgatttttact
tgtgagaagcgctgcctcaaaaaacgctcttgtggccgacacaaatgtggcgagttgtgc
tgtgtgggcgcggaacacaagtgctctctgatctgtggctacaagctcaactgtggcctc
caccgctgccaagagctctgtcaccgtgggaactgccaaccctgctggcaaaccagtttt
gatgagctggcgtgccactgtgggttgagtgtcctgttcccccccatcgcctgtggcacc
aagcccccagagtgtaagaacccgtgtaccaggaggcacgagtgtgaccacccagtgttc
cacaactgccacagtgaggagaagtgcccaccctgtacctacctcactcagaagtggtgc
atgggaaagcatgagcgaaggagcaacatcccgtgccaccttcaggacatctcctgtggc
ctggcctgcaacaaggttctgctgtgtgacctccaccgctgccgccgcatctgccaccgg
gccgagtgtctggccgagggcgtctgccgccagccctgcctgctgccccggcccaactgt
ggccacccctgcaacgccccttgccacaagggcaccagctgcccgtgcaacacctgcact
gccaaggtggcgctacagtgcgactgcggtcggagaaaggaaacggtggtgtgcacggaa
gcagccagcgcccatcagaggtatgcagccattgccatggccagtaagctgtctgacatg
cagctgggtgactctgtagacatgggtcttatcactaagaaggagatgaaacacaccaag
ttggagtgtgacgaggggtgtgctgcactggaaaggaacaggcgattggctgaggccctg
cagattgacccgtcagtggaccccttcaatatgcgctcctcctcctcaacgtacagtgac
agcctcagagttgacgccagaaaagattttaagtttgtcagcgaggtagaagaggagatc
aagaatctggttgagctgaccagcaagggtaaacagtccaaaaggagccactgcttcccc
cctatgaaccgggagcacaggaagctagtccacgagctggccgaggcctacaacgtggag
agtgtgagctacgacagcgagcccaaacgcaacgtagtcatcaccgccatcagggggaag
tctgcctgtcctaactcaaccctgacctccctgatggagcgagacactggggtcccgagg
gctcctccacccattgcccatatcaaacatagcagcaaggctgacagtgtgagcagctgg
tccaaggcagtcaaagaagagccggtgatcgactacttcgatgtccaggattaa
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