Salvelinus namaycush (lake trout): 120051150
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Entry
120051150 CDS
T07522
Name
(RefSeq) leucine-rich repeat LGI family member 3-like
KO
K19999
leucine-rich repeat LGI family member 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120051150
Membrane trafficking [BR:
snh04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
120051150
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
120051150
NCBI-ProteinID:
XP_038853786
UniProt:
A0A8U0UJB4
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Position
Sna1:24697082..24707887
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AA seq
550 aa
AA seq
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MLDAGSRRVPGWLRLLAGLSLLLCLVGETGAKRVPKIPRCPVTCSCTKDSAFCVDTKAIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLSHLQYLFV
ENNDVQALSKHTFRGLKSLTHLSLSNNNLQFLPRELFKYLDILTDLDLRGNSFRCDCKIK
WLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVETY
EFNNNQFVAFAQPDTGFCTLFVWDHVEMVFRRYHNITARSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TFDVQMVKHFWVRNVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFTVGPRQ
YLLLGSDFSFSRVYLWDDLTQHFQPFQELNMRAPRAFSLVSVDNKDMLLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgccggatcgagaagggtcccgggatggctgaggctgttggccggcctaagt
ctgcttctctgcctggtgggggagacaggggccaagagggtccccaaaatcccccgctgt
cctgtcacctgctcctgcaccaaagacagtgccttctgtgtggataccaaggctatcccc
aagagctttccccctgggatcatctctctgacaatggtgaatgcagccttcactacaatc
ccagagggagccttctcccacctgcacctgctgcagttccttcttctgaactccaatacc
ttcactgtggtggctgatgatgcctttgcaggtctgtcacacctgcaatacctatttgta
gagaacaatgatgtccaagccctgtcaaagcataccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacctgcagttccttccacgagaactcttcaaatatctt
gatattttgacagacttagacctgcggggtaactcgttccgctgtgactgtaaaatcaag
tggctggtggactggatggagaagaccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggccgcagaatccatgatctcaccccacgagacttcaactgtatc
agcgcagactttgcagtttatgagacttttcccttccagtctgtgtcagtggagacctat
gaattcaacaacaatcagtttgtggccttcgcccagcctgatactgggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggaggtaccataatataacagctcgctcc
gctgtctactgcaagcctgtggtcataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagatccag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgccgtggcagacagttccaaggcaggctctacgagcatataccgctgg
aacagcaacggtttctactcccaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaagggaagcagcgtctcattctctccagtgcctcccagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actttcgacgtgcagatggtcaagcatttctgggtgcgcaacgttctctacctttgcctt
acacgcttcattggtgactccaagattctccgatgggaagggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcactgtgggtccccgtcag
tatcttctcctagggagtgatttctccttctctcgagtttacctgtgggatgacctcacc
cagcacttccagcccttccaggagctcaacatgagagcaccccgggccttcagcttggtg
tcagtggacaacaaagacatgctgctggcagccagctttaaaggcaacaccctagcctac
cagcacctaatagtggatctcagtgccaaatag
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