Salvelinus namaycush (lake trout): 120051195
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Entry
120051195 CDS
T07522
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120051195
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120051195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
120051195
NCBI-ProteinID:
XP_038853852
UniProt:
A0A8U0R474
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All DBs
Position
Sna7:34336140..34424474
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AA seq
1187 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPASPSSTTRTQIRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPAAGATGVNGHGGGVFNGGAAAPLQGAVQAVMLPTMGLV
SPISINLADLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQD
GNATKIIINYSLDPSQTRTQLTAQNLKKEPPTLATTPGQAQAATEPSSKTQQKLPEDLTV
SRPPRSKEEKMEEETTKTCLLCNECPDGLDALHTLKHCKKASGLRINGDKSKSAIDSLLS
EGFGDQPKNLLSLLKAYFALNVEPTKEELSKISDSVSLPADVVKKWFDKMQSGQVSLGAP
TPPSEEEGPLSECHGAIVVSPKVRSEQDTESPTLMQSSPAEATPAEVNGSGPCPASPTPL
NLTTGGPVPAKPSSPDSTEVPLDLSLPKPTREETAATAASYQATVYSHQDEPLNLTKTCT
TKKERPLSASAAGHHVTSQTLSLYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVPCL
RALTTNNNQTILIPQLAYTYTTTATASSPAGTETQEKTTLQINGIKEERQDTSSEGVSTM
EEQNDSDTTPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAF
KHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGGQGGVGEE
MLEIESPVGLGLGEEQQEQSDSRPTSSPPSHLDSDERGSSTREDEEESDEDMETVAGEAV
EGDPDSVLDMDDIQVVRIGDEGGDEEEEREEEGENTGQEGGENEEEEEQEVKRIVVGGEE
EEGEEEEEEGVVGVEVKEEQEEKEVTGEKAHTRQEEVKENSEKEEEHGGEKEQAEKEVEE
ERSEQAQEVKEETMDTEEVLTSEEKEESGEVMKENEGETNGNTVSED
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtggtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtctggcagacggggctgactgtgacagcaacgtaccc
agtgaagatcacaacggagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccccgtcaggggacgcctgaggccagcgga
catgacgagaatggcactccggatgcattctcacagctcctcacctgtccctactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccatgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccggaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcaccacctgaaa
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgg
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcccgcaaaggcctcccaatgcccatccccagccatg
cccgcctcgccctcctccaccacacgcacccagatccgagacaaacccttgcaggaacaa
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagcagcgggggcaacaggagtgaacggtcacggaggaggggtgttcaacgggggt
gcggctgcccccctgcagggcgcggtgcaggcggtgatgctccccaccatgggcctggtc
tctccgatcagcatcaacctggcagacctacagaacgtcttgaaggtggcggtggacagt
aacatgatcagacagatgttggagaacaacgctaagtcagcggggactggcatgggggcg
acaggtgttcctcaccagcagctcatctcagccatcagtctgcccattatgggtcaggac
ggcaacgccaccaagatcatcatcaactacagcctggaccccagccagacacgcacccag
ctcactgcccagaacctgaaaaaggagcccccgaccctggctacaacaccaggccaggcc
caggctgccacagagccctccagcaagacccagcaaaaactcccagaggacctgacagtt
agcaggccccccaggagcaaagaggagaagatggaagaggagactactaagacctgcctg
ctttgtaacgagtgccccgatggtctggacgctctccacacactcaagcactgtaagaaa
gcctcaggcctcaggatcaatggggacaaatcaaagtctgccatcgattcattattgtct
gaggggttcggggaccagcccaagaaccttctgtccctcctcaaggcctacttcgcctta
aacgttgagcccacaaaggaggagctcagcaagatctccgactcggtcagcctgcctgcc
gacgtagtcaagaagtggtttgacaagatgcagagcggtcaggtctcactaggggccccg
acccctccgtctgaggaagaagggcccttgtctgagtgtcatggggccattgttgtgtcc
cctaaagtaagatcagagcaggacacagagagccccaccctgatgcagtccagcccagct
gaggccactccggctgaggttaacggctctgggccctgcccggcctcccctacaccacta
aacctgaccaccggggggcccgtcccagccaaaccctcctccccagacagcacggaggtc
cccctggacctgtcgctaccaaagcccacccgagaggagaccgctgccaccgcggcctcc
taccaagccactgtttactcccatcaggacgaacccctgaacttgacgaagacttgcaca
accaagaaagaacgtccgctctctgccagcgccgcaggccaccacgtgactagccaaacc
ttgtccttgtacaccgccggcccacaaagtgccaaccccatcagcatcatgaccactcag
ctgcccagcgggaccatctatgccatcactgatcagggcagcacgggtgtgccctgcctc
cgggcgctcaccaccaataacaaccagactatcctcatcccgcagttggcctacacctat
accactacagctacagccagcagccctgcagggacagagacacaggagaagaccacactg
cagatcaacggcatcaaggaggagcgtcaggacacaagctcagagggagtgtctaccatg
gaggagcagaatgactcagacaccaccccttccaggaagaagatgaggaagacggagagt
gggatgtacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctgctccga
cataaatacgaacacacaggcaagagaccccacgagtgtggcatctgcaggaaggccttc
aaacacaagcaccacttgatagaacacatgcgtctccactccggagagaaaccctaccag
tgcgacaagtgtggcaagcgcttctctcactcaggctcttactcccagcacatgaaccac
cgctactcctattgcaagaaggaggcgcaggggggaggtcagggaggtgtaggggaggaa
atgctggagattgagagccccgtggggttgggcctgggagaggagcagcaggagcagtcg
gacagcaggcccacctcctcccctccctcccacctggactctgacgagcgagggagcagc
accagggaggatgaggaggagagtgatgaggacatggagacagtggcaggggaggcggtg
gagggagatccggacagcgttctggatatggatgatatacaagtggtgcggataggagat
gagggaggggacgaggaggaggagagagaggaggagggagaaaacactggtcaggagggg
ggagagaatgaagaagaggaagagcaagaagtgaagagaatagtggtagggggtgaagag
gaggaaggagaagaagaggaagaggagggggtagtgggggttgaagtaaaggaagaacag
gaagaaaaggaggttacaggggaaaaggcacatacaaggcaagaggaggtaaaggagaac
agtgagaaagaggaggaacatggaggagagaaggagcaggctgagaaggaggtggaggag
gagcggtcagagcaggctcaggaggtgaaggaggagacaatggacacagaggaagtgttg
acctcagaggagaaggaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaac
gggaacactgtttcagaagactag
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