Salvelinus namaycush (lake trout): 120051201
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Entry
120051201 CDS
T07522
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120051201
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120051201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_17
TPR_14
TPR_11
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
120051201
NCBI-ProteinID:
XP_038853869
UniProt:
A0A8U0UHG4
LinkDB
All DBs
Position
Sna1:complement(26627459..26997990)
Genome browser
AA seq
2478 aa
AA seq
DB search
MELLHLFALYLQFSIFGSRTVGRAAQREAEEEGGRCGLNKAEFMERVQQSNEACQRGDFQ
TAVSLYGDALRADPQNCILYSNRSAALLKLGRYQASLDDAVKACLLNPKWPKAYFRQGVA
LQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSP
FVVVSVIGQELLTAAHHTASVVVLESALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTG
YMQQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASM
ALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQ
CHEQHLGIAKALTSKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMR
AYAGLGHAARCMQDLERAKQYHQQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALK
LHKTHLSIAQELTDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQAS
THGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVP
YYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYEQDLALAKDLHDKLSQAK
AYCNLGLAFKALGNFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQ
FYEQQLALAHQMKERRMEACAYASLGATYRLVQKYDKSLGYHTQELEVYQELGDVPGECK
AHGHLAAVYMALGKYAMAFKCYEEQLELGRRLKDPGVEAQVYGNMGITKMNVGVMEEAIG
YLEQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQD
QEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQ
AISCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGSPAR
QGRAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQ
AVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQ
HSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSD
PYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVPEGGPD
LHEGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKL
NSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSSLPRRPSSLSKPPLRALY
DLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPS
IRGMGTISKSHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSEL
LGCQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVPGGAGAGTGGRG
AGGGRRGSGGRGRKGSFGSSYTIPESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTAL
LNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPE
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAG
TGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNM
VGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPLGYPNPP
FSPPCLDNLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHPHVPRS
RSSPHGAAAAAGVGRGDDEEYEGFSIISSEPLGSHCDSLPLPLGHGQRHLHRGGRGVVGG
SSSGTGRGYQVSVSSRGSVSTPTSPVKTSLVPSSNSPFQKVPGKVSSSDTGESDQSSTET
DSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGVEGAAAGATARSSAFRSSE
TSAFSRPSSSASVRAQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDSSHPSPTLDSH
AQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSSPADAPDLD
RLRRGVIDEKVVAIHNLKTFWANAAAQQQQQHLGPVRALRGAPGSLVSAKRDVLSLLNLS
PRHCSPSDAQDSLELRELGLHSLDRGSKNPSNGHNPRKMAPSPTISTSSSPGARSIRLPA
GNGYKFLSPGRFFPSSKC
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atggaacttctccacctctttgccctctatctccagttttcaattttcggctcccggaca
gtgggcagagctgcgcagcgtgaagctgaagaggaagggggccgatgtggcctcaacaag
gcagagttcatggagagagttcagcagagcaatgaggcctgccaacgtggtgacttccag
actgccgtgagtctctatggcgacgccctgcgagccgacccacagaactgcatcctctac
agcaaccgctcagcagcccttctcaaattgggacgctaccaggcttccctggacgacgct
gtcaaggcctgtctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcc
cttcagtaccttggtcgccatgccgacgctctggccgcctttgcctcggggctggcccaa
gaccccaagagcctgcagctattggtgggcatggtggaggctgccatgaagtccccacta
cgagagtcactggaacccacctaccagcagctgcagaagatgaaactggacaagagtccg
tttgtggtggtgtcagtgattggtcaagagctgctgacagcggcccaccataccgcctcc
gtggtggtactggagtccgcattaaagatcggcacctgcagcctcaagctgcgcggctcc
gtcttctcagccctcagcagtgcccactggtccctgggcaataccgagaagagcaccgga
tacatgcagcaagacctggaggtctccaaaacactaggtgaccaaacaggtgaatgtcgt
gcccatggtaacctgggctcagcattcttctccaaagggaactaccgcgaggccctgact
aaccatcgccaccagctggtcctggccatgaagctcaaggacagggaggcagcctctatg
gccctgagcagcctgggtcatgtgtacacagccatcggggactaccctaatgccctggcc
agccacaagcagtgtgtcctactggccaagcagtccaaggaccagctgtcggaggcacga
gagctgggcaacatgggcgccgtctacatcgccatgggcgactttgaaaatgctgtccaa
tgccacgagcagcacctgggcatcgccaaggccctgaccagcaagagggaggaggcccgt
gcctacagcaacctgggcagtgcctatcactaccaccgtaactttgacaaggccatgtcc
taccacacccatgtgctggagctggcccaggagctggaggagcagcctatagagatgagg
gcgtacgctggactggggcacgctgctcgctgcatgcaggacctggagagagccaagcag
taccaccaacagcagctggccatcgctgagggcctgaaggacagggctgcagagggaaga
gcctcctccaacctgggcattatccaccagatgaaaggggactatgaaactgcactgaaa
ctccacaaaacccacctctccatcgcccaggagctcactgactatgctgctcagggccgt
gcctacggtaacatgggcaacgcctacaacgcgttgggggcctttgaccaggccgtgcgc
taccaccgccaggagctacagatctccatggaggtcaacgaccgagcctcccaggcctcc
acccatggtaacctggccgtggcctaccaggctctgggggcgcacgaccgcgccctgcag
cactaccagaaccacctcaatatcgcccgcgagctgcgagacgtccagagtgaggctcgc
gccctgggcaacctggggaacttccactgctcccggggagagttcccccaagccgtgccc
tactacgagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaa
gtctgccacaacctgggctacgcccactactgcctgggaagctaccaggacgctgtcaag
tactatgagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaag
gcctactgtaaccttggactggccttcaaggctctgggtaacttcaccaaggcagaggag
tgtcagaagtacctgctctctctagcccagtctcttaataatgcacaggcccgcttcaga
gccctgggcaacctgggggacatctttgtctgcaagaaggatgtgaccggagctatccag
ttctatgagcagcagctcgccctggctcaccagatgaaggagcgcaggatggaggcgtgc
gcctacgcttccctgggtgccacctacagactggtgcagaagtacgacaagtccctgggc
taccacacccaggagctggaggtgtaccaggagctgggcgatgttcccggggagtgtaaa
gcccacggccacctggcagctgtctacatggccctggggaagtatgccatggccttcaag
tgctacgaggagcagctagagctgggccgcagactgaaggacccgggggtagaggcccag
gtctacggcaacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggc
tacctggagcagcagttggccaccctgcagcagctgagtggcaacgaggccgtactggac
cggggcagggcctatggtaacctgggagactgttacgaagccttaggagactttgaggag
gccattaaatactacgaccagtacctgtctgtggcccagagcctgaaccgcatgcaggac
caggagaaggcttaccgaggtctgggcaatggacacagggcgatgggtaacctgcagcag
tccctggtttgctttgagaagcggctggtggtggcccatgagttgggggagtgtggcggg
aaggcccaggcctacggggagctgggggcgctccacagccagttggggaactatgaacag
gccatctcctgtcttgagcgccagctaggcatcgcccgcgacacccaggaccgcccacta
gagggcgacgctagttgcggcctgggcgtggtgtaccagtccatgggggagtatgagaca
gccctgcgctgccaccagagtgacctggagatcgcagaggagacgggcagccccgcccga
cagggccgtgcctatggcaacctgggcctcacctatgagtcactgggcaactatgagcgt
gcggtagtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcagcc
aagaccctggcctacggtagcctggggaggacacaccacgcactgcagaactactcacag
gctgtcatgtatctgcaggaaggcctacggctggcggagcagctggctcggcgtgaggat
gaggctaagatccgacatcgtctggggctgtctttgtgggccagtgggaacctggaggag
gcccagcaccagctctaccgagcgtctgcactgtttgagaccattcgtcacgaggcccag
cacagcaccgactacaaactgtctctgtttgacctgcagacttcctcctatcaggcactc
cagagggtcctcgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggt
cggacacgagcatttgctgacctgctggtggagaggcagacaggccagcaggactcagac
ccctacaccccagtcacagtggagcacatcctggacacggtgaacagccagagggccctg
gtgctctacttctccatggctgctgggtacctgtacagctggctgctggctccaggagca
ggcatcctgaagttccacgaggtgtacttgggagagggcgtgccagagggcgggccagac
ctccatgagggtgggggagggggtgtggccagcggctcatctttggagcagcacattgcc
agtgctcgggaggccctgggagtagagtcctactacagcaggggttgttccagcagtgag
acagagagtgaggcaggggacctgttggaccagcagtttgaagagctcaacaacaaactc
aactctgtgactgaccccactggcttcctccgcatggtgtccagaaacaacctcttcaac
aggagctgccagagtatgaccagcctgttcagtaacacaatgtccccagctaaagatggc
tgctcctctctgccccgccgacccagcagcctcagcaaacctcctctccgtgccctctac
gacctgctcatcgcacccatggaagggggcctgatgcactccagtggtcccgtgggcaga
cacagacagctggtgttggtgttggagggggagttgtacctcatccccttcgccctgctg
aagggcagctcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccttcc
atccggggcatggggaccatctccaagagtcattctcggcgggcggggccggcttcctgc
gggggcgtgtccatggcggcggtggtggggaaccctcgtctgccgtcgtctgtgatggac
cgctggctgtgggggcccatgccctctgccgaggaggaggccctcatggtgtctgagctg
ctgggctgccagcccctggctggatcctctgccaccaaggagagggtgatgagtgccctc
acccaggccgagtgtgcccacttcgctacccacatctcatggaagctggccgccttggtg
ctcacacccaacccagagagtgtacccggcggggcaggggcggggactggagggagaggg
gcagggggagggaggagaggcagcggaggcaggggcaggaaaggctcgtttgggagcagc
tacaccatcccagagagcctgcacctgcaggatgatgggagcgacgcggagagtatctgt
gacagcccacccctgcaggagttcctgcttaccgctgctgacatactggacctgaggctg
cctgtcaaactggtggtgctggggtcataccaggagtccagcagtaaggtgacagcagac
ggtgtggtaggtctgaccagggccttccttgctgctggggcccagtgtgtcctggtgtct
ctgtggcctgttcctgtgtcagcctccaaagtgttcgtccatgccttttacaccgctctg
ctcaacgggaccaaggccagtgctgccctcgcagacgccatgaagactgtccagagcagc
aagcagtactcccacccctctaactgggcaggttacatgctgattggtaatgatgtcaag
ctaaacagcccctcgtccctgattggccaggctctagcagagatcctacagtatccagag
agagcacgggatgctctgcgagtcttactgcacctggtggagaagtctctccagaggatt
cagaacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtgggg
ggcgtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggc
accggcatccctgctgctgtcttcttccccacagcagaccctggagacaggctgcagcag
tgtagtaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgt
aaactcatcaccgcctctgaggcaggcgagcagctcatcaaccgggctgttaaaaatatg
gtgggaatgctccaccaggtgctggtccagctgcagacaggggagaaggagcaggacttc
tctctgctgcccatccaggtgtccatcagtgtgcagctctggagactgccagggtgccat
gaattcctggctgcactagggttcgacctgtgtgaggtgggccaggaggaggtggtactg
aagacggggaagcaagccaaccgccgcaccatgcactttgccctccagtccctactggca
ctatttgactccacagagctgccaaagcgtctcagcctggacagctcgtcctccctggag
tccctggcctcggcccagtctgtctccaaccccctaccgctgggctaccccaacccaccc
ttctccccaccctgcctggacaatctggcctcagatgccatctccgtctacagcctgagc
tccgtggcctccaccatgagctttgcgtccaagtcagagtgtgacttcctgggccatcga
cagcgtggtggggccacagcacacttctctgcccacaaacacccacacgttccccgcagt
cgctcctctcctcacggggcggctgcagcagcaggagtgggccggggagatgacgaggag
tatgaaggcttctccatcatcagcagtgagcctctgggaagccactgtgactccctgcct
ctacctctgggtcatggtcagcgccacctccaccgcgggggcaggggtgttgttgggggg
tccagctcaggcactgggcggggttatcaggtgtctgtgtcgtcacgaggcagtgtcagc
acccccacctcccctgtcaagaccagcctggttcccagctccaactctcccttccagaag
gtgccaggcaaggtgagcagctcagacacaggtgagtcggaccagtccagcactgagaca
gacagcaccgtcaaatcccaggaagagaagactgtccctctggatccccaagagctggcc
cagaagatcctggaggagacccaaagccacctgcgggcagtggggagtctacagcgggct
ggggttgagggggctgcagctggagccacagcacggagctctgccttccgctcctcagag
accagcgccttcagccgtcccagtagcagcgccagtgtccgcgcccagtcctccccacga
cccaaacctccgtcccgctcttcctctctgcagaagatcagctctggttacaacagccct
gcagcctcggagacctccctgaaggatagcagtcacccctcccccaccctggacagccat
gcccagttcaagctaaaataccctagctccccctatagtgggcacatctcccgctctccc
agtaacgtgtcccccagctctggccaccagtccccagctggcagtgccccatctccagct
ctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagacctggac
cgcctcagacggggagtaattgatgagaaggttgtggccatccacaacctgaagacattc
tgggccaatgcagcggcccagcaacaacagcaacatctgggtccagtccgtgctctccgt
ggcgccccaggatccctggtctctgccaagagagatgtgctgagccttctgaacctctcc
ccacgacactgctcccccagcgacgcccaagacagcctggagctgcgggagctggggctg
cactcgctggacaggggcagcaagaacccctccaacggacacaaccccagaaagatggcc
ccctcacccactatttccacgagcagcagccctggtgctcgctcaatcagactacctgct
ggcaatggatacaagttcctctcccctggcaggtttttcccctcctccaaatgctga
DBGET
integrated database retrieval system
