Salvelinus namaycush (lake trout): 120051216
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Entry
120051216 CDS
T07522
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120051216
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120051216
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120051216
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120051216
Peptidases and inhibitors [BR:
snh01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120051216
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Others
120051216
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Others
120051216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
eIF-3c_N
Insulin_TMD
CDC45
Motif
Other DBs
NCBI-GeneID:
120051216
NCBI-ProteinID:
XP_038853879
UniProt:
A0A8U0R5H1
LinkDB
All DBs
Position
Sna7:39266630..39304146
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AA seq
775 aa
AA seq
DB search
MGDRMALLLLVVATTALAVEVPTDGGMGLLAEPQVAMFCGKLNMHVDVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSVQNWCKKGRKQCRSHLHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDKCESHLHWHTVAKESCGDRTLNLHDYGMLLPCGIDRF
RGVEFVCCPSDRETDSTEQDEDDSDVWWGGAETDYTDNSMARGAAEPAESTPQQQQEEEE
EETEETAPAMVEEDDDEEEGQEVLDNDQDGDGDEDEEDDDDDVIDERDDSEPTTNIAMTT
TTTTTTESVEEVVREVCWSNAETGPCRAMLARWYFDHEEGRCAQFIYGGCGGNRNNFESE
EYCLSVCSNVMPTAAPSSPNAVDRYLETPGDDNEHAHFAKAKESLEAKHRERMSQVMREW
EEAEREAKSLPRADKKAVIQRFQEKVEALEQEAASERQQLVETHMARVEALLNDHRRLAL
ESYLTSLQAEPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLTH
LRVIEERMNQSLGLLYKVPGVADDIQDQVELLQKEQADMAQQLSNLQSDVRVSYGNDALM
PDSLPDSTRASLDLLPQEEDLDMGLDGLGFIHPESFNQVNTDNQVEPVDARPFPDRGFPT
RPVSGLKPEEIPELRMEAEERHSTGFEVHHQKLVFFAEDVGSNKGAIIGLMVGGIVIATV
IVITLVMLRKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccgtatggctttgttgctgctggttgttgcgaccacggcgctagcagttgag
gtgccgacagatggtgggatgggcctgctggcggagccccaggtggccatgttctgtggg
aagctcaacatgcacgtggatgtccagagtggcaagtgggagtcggacccttccggcacc
aagagctgtatcggcaccaaggagggcatcctgcagtactgtcaggaggtataccctgag
ctgcagatcaccaacgtggtggaggccaaccagccagtcagtgtccagaactggtgcaag
aagggccgcaagcagtgccgcagtcacctgcacatcgtggtgccgtaccgatgcctagtg
ggggagtttgtcagtgatgccctgctggttcctgataagtgcaagttcctgcaccaggag
cgcatggacaagtgtgagagccacctgcactggcacactgtggctaaagagtcctgtgga
gaccgcactttaaatctccacgactacgggatgctgttgccgtgcggcatcgaccgtttc
cggggggtggagtttgtgtgctgtccgtcagacagggagaccgacagcactgagcaggac
gaggatgactcggatgtgtggtggggaggagccgagactgactacactgacaacagtatg
gcaaggggggcagcagagccagctgaatccacgccccagcagcaacaggaggaagaggag
gaggagacggaggagacggccccagccatggtagaggaagatgatgatgaggaggagggg
caggaggtgctggacaacgaccaggatggagacggggatgaggacgaggaggatgatgat
gatgacgtcattgacgagcgcgacgatagcgagcccaccaccaacattgccatgactacc
acgacaactactaccactgagtctgtggaggaagtggtcagagaggtgtgttggtcgaat
gcggagacgggcccatgccgtgccatgcttgcacgctggtactttgaccacgaggagggc
cgctgtgcccagttcatctatggcggctgcggtggcaaccgcaataactttgagtcggag
gagtactgcctgtctgtatgcagcaacgtcatgcccaccgccgcccccagctctcccaac
gctgtggaccgttatctggagacacctggggatgacaacgaacacgcccactttgccaag
gccaaggagagcctggaggccaaacaccgcgagaggatgtcccaggtgatgagggagtgg
gaggaggcagagcgggaggccaagagtctacctcgtgctgataagaaggctgtcatccag
cgtttccaggagaaggtggaggccctggagcaggaggcagccagtgagcggcagcagctg
gttgagactcacatggcccgggttgaggccctgctcaatgaccatcgccgcctggccctg
gagagctacctgacctccctgcaggccgaaccacccaggcctcgtcatgtgttcagccta
ttgaagaagtatgtccgtgcagagcagaaggacagacagcacacccttaaacactttgag
cacgtccgcatggtcgaccccaagaaggccgcacagatccgaccccaggtactgacccac
ctgcgtgtgattgaggagaggatgaaccagtccctgggtctgctctacaaggtgcccgga
gtggccgacgatatccaggaccaagttgagttgttgcagaaggagcaggcagatatggcc
cagcagctgtccaacctgcagagtgacgtgcgggtgagctacggaaatgacgccctgatg
cccgacagtcttccagacagcaccagggcttccctggacctgctgccccaggaagaagac
ctggacatgggcctggacggactgggcttcatccaccccgagagcttcaaccaggtcaac
acagataaccaggttgaacctgtggatgcccgcccttttcctgatagaggctttccaaca
cgaccagtgtctggtctgaagccagaggagatccctgagctcaggatggaggcagaggag
aggcacagcaccggattcgaagtgcaccaccagaaactggtgttcttcgccgaggatgtc
ggctctaacaagggcgccatcatcgggctgatggtgggaggcatcgtcatagcgaccgtc
atcgtcatcaccctggtgatgctgaggaagaagcagtacacgtccatccaccacggagtc
gtcgaggtggatgcagcagtcacccctgaggagcgccacttgtccaagatgcagcagaat
ggctatgagaaccccacctacaagttttttgagcagatgcagaactaa
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