Salvelinus namaycush (lake trout): 120051324
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Entry
120051324 CDS
T07522
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120051324
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120051324
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_9
TIR_2
LRR_NXF1-5
DHU1_N
LRR_EndoS
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120051324
NCBI-ProteinID:
XP_038854070
UniProt:
A0A8U0R2Y1
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Position
Sna7:complement(48240154..48244095)
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AA seq
972 aa
AA seq
DB search
MTLKITMPGKQSGSTFSQLRLFLCFLMYCWGLADPACGYFLKNCTIRGNLSDPSDMKVLC
YNRNLEVIPIAIPRKVSNLDLAMNNISKIEKLDFKGLSNLKFLNMSRNQISQVDDGALGH
LEALQELGLAHNRLTTLSDHLFQGLVNLSLLHLDNNLIATISSSSFQLLSSLKTVNLTKN
NLENMKEVQPIVQLPHLHELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGIFRITAD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLSNVNRLNLSGIEMSFERMGMVLQTVNSSLVH
LRLHDLVNVSRLKIIALTDIACRIPTLSVLRLEYNNIGNLSEEFLQSCKHLTEVDISNTG
LTQLSDFSFRSIEQLSALKLGHNRLSFVPKATKNLPTLKILDLSFNIINKLGCSDFSNLT
ELTQLIIFHNQIPNLPGCVFQDLKELRILKMGSNKILTLNDAFMNALHKLEALNLAGNKL
SSIRKGEFKSLTSLKTLLLFDNQIASMEDGAFEGLVNLTELKLGSNKITQIGIRNTVLMG
LPLLKSLDISCNYITYVNDDKLNPPPFSHLTSLENLRIFSQRHKGLSHLPINFLEGLKSL
LSFQAGSLNIKELYPDTFIYTPRLWFLDISKNEFTALTPKLFHPIPRLNSLYLTKARIQS
LDFLIGANLSRVTLLQVSKNDITVVNETVLRSLPALTYLDMQDNAFTCGCSDAWFVQWIE
SDNQTQVVGAGEFTCNYPADLKDTKLLDVELQFCIVRLGLYYYISTTCLVLLTLIASFAY
HFLKWQVIYGYYLFLAFLYDTKQRNKHTPHGCQYDAFISYNAHDEPWVLRELLPELEGEQ
GWKLCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISRRYLESEWCSREIQVASFRLFDEQ
KDVLILVFLEEIPTHQLSPYHRMRKLVKRRTYLSWPRAGEHTGVFWQQLRLALETKDGPA
EENPILSGVQAL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagataaccatgccaggaaaacaaagtgggtctacattctctcagctgaga
ctctttctttgtttcctgatgtattgctggggtctagctgatccagcatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacccctctgacatgaaagtactctgt
tataacaggaatcttgaagtcatacctatagctattccgcggaaagtaagcaatttagac
ttggccatgaataacatttccaagatcgaaaagttggattttaaaggcctatcaaacctc
aaatttctaaacatgtccagaaaccagatctctcaagtggacgatggggctcttggacac
ctagaggctcttcaggaactgggtttggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctggttaacctctccctgctacatctggacaacaacctcattgcaacc
atcagctcctcatcctttcagcttctctccagtttgaagacagtgaatttaaccaagaac
aaccttgagaatatgaaggaagttcagcccatcgtacaattaccacacttacatgagttg
tacattgggagcaacagattcacctctttccagtcacaggaaatatcaaatacgtctata
gagctgaggctgttggatttatcccggaatccattgggaatcttcaggatcacggcagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtgctggacaggtcttttctgagcaacgtcaatcgtctcaacttgagcggcatt
gagatgtctttcgagaggatgggtatggtactgcagactgtcaactcatcattagtccat
ctgagattgcatgacctcgtcaacgtctcaaggctcaagatcattgctctcactgatatt
gcctgccgtatacctacactcagtgtgctccggctggaatataacaacataggtaatctc
tctgaggaatttctgcagtcatgtaaacacctgacagaagtggacatatcaaatactggt
cttactcagctgtctgacttttcattcagatcaatagagcaattaagtgctttgaaactg
ggccacaataggctttctttcgtgccaaaggccacaaaaaatctaccgacactgaagatc
ctggatctcagcttcaatatcatcaataaactaggctgctcagatttctccaatcttaca
gaactcacacaactcattattttccacaatcaaatccccaaccttccgggatgtgttttc
caggatttgaaagaattaaggatccttaaaatgggatcaaacaaaatcctgaccttgaat
gatgccttcatgaatgctttgcacaaacttgaggctttgaatttggcaggcaataaactg
agctctatcagaaaaggagagtttaaaagcttaacatcactcaagactttacttttattt
gacaatcagattgccagcatggaagatggagcctttgagggattggtcaaccttacagaa
cttaaactgggctcaaataagatcactcaaataggcatacgaaatactgtgctcatggga
ctcccactcttaaaaagtcttgatatatcctgtaattacatcacatatgtaaatgatgat
aaactaaaccctccacccttctctcatctgacatctctggagaacctcaggatatttagt
cagcgtcacaagggactgtctcatctaccgatcaacttccttgaaggactgaaatcttta
ttgtcattccaggcagggagtcttaatattaaggagctgtacccagacacattcatttac
acaccccggttgtggttccttgatatcagtaagaatgagttcacagccctcactccaaag
ctgtttcacccaatcccaaggctcaacagcctgtacctaaccaaagcccgaattcagtcc
ttagatttcctcataggagcaaacctcagtagagtcactttattgcaggtgagcaagaac
gacataacagtagtcaatgagacagtgttgcgttctctccctgccttgacatacctggac
atgcaagataatgctttcacctgtggctgcagcgatgcttggtttgtccagtggatagag
agcgacaaccaaacacaagttgttggtgcaggagaatttacttgcaactatcctgccgat
ctaaaggacaccaagctgttggatgttgagcttcagttctgtatagtacgcttaggactt
tactactacatctctaccacttgtctggtcctcctcaccctgatagcatcctttgcctac
cacttcctgaaatggcaggtaatttacggctattacctcttcctggctttcctctatgac
accaagcaaaggaataagcacacgcctcatggctgtcagtacgatgccttcatctcctac
aacgcccacgatgagccctgggtcctgagggagcttctgccagagctggagggagagcag
ggctggaagctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaac
attatggacggcatctacggaagccgcaagaccatctgtgtgatcagccgccgctacctg
gagagtgagtggtgctcccgggagatccaggtggccagcttccggctctttgatgagcag
aaggacgtcctgattctggtgttcctggaggagatccctacccaccagctgtcaccctac
caccggatgaggaagctggtgaagagacgcacctacttgagttggcccagagctggggag
cacactggggtcttctggcagcaactacggctggctttagagaccaaggacggccctgct
gaggaaaatcccatcctctctggtgtgcaggctctgtga
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